RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 USP27XA6NNY8 438 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 ABLIM1O14639 778 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 TSPAN1O60635 241 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CLSTN1O94985 981 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CCDC175P0C221 793 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 HSPA6P17066 643 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 FGFR4P22455 802 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CYLC1P35663 651 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 TNFSF9P41273 254 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 PIK3CAP42336 1068 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 BIRC3Q13489 604 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 SURF1Q15526 300 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 ASIC2Q16515 512 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 TDRD12Q587J7 1177 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 IQCEQ6IPM2 695 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 GDF6Q6KF10 455 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 WDR59Q6PJI9 974 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 TOGARAM2Q6ZUX3 1019 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 RSPH3Q86UC2 560 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 THNSL1Q8IYQ7 743 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CHP1Q99653 195 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 ADAMTS10Q9H324 1103 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 DEF6Q9H4E7 631 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 MYO6Q9UM54 1294 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 PPP2R2CQ9Y2T4 447 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 TTC3P53804 2025 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 MYO16Q9Y6X6 1858 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 PMM2O15305 246 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 FAM189A1O60320 539 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 GPR32O75388 356 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CABYRO75952 493 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 IPO7O95373 1038 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 MCF2P10911 925 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 DARSP14868 501 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 MCCD1P59942 119 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 OSTNP61366 133 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 MRPS6P82932 125 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CDK17Q00537 523 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 DCAF4L1Q3SXM0 396 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 SLC9C1Q4G0N8 1177 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 DNTTIP2Q5QJE6 756 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 DPY19L2P1Q6NXN4 242 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 GJB7Q6PEY0 223 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 NME8Q8N427 588 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CEP120Q8N960 986 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 FBXL13Q8NEE6 735 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 PPP1R13BQ96KQ4 1090 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 C16orf45Q96MC5 204 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 PTPRHQ9HD43 1115 aa11.28□□□□□ -0.6
LINC00173-203ENST00000480237 AJAP1Q9UKB5 411 aaPredicted RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 CPSF3Q9UKF6 684 aaKnown RBP11.28□□□□□ -0.6
LINC00173-203ENST00000480237 BRCA2P51587 3418 aa11.27□□□□□ -0.6
LINC00173-203ENST00000480237 PTPRJQ12913 1337 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 PHACTR2O75167 634 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 IL18RAPO95256 599 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 RPLP2P05387 115 aaKnown RBP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 CXCL8P10145 99 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 ACLYP53396 1101 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 WNT7BP56706 349 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 JAM2P57087 298 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 ARID5AQ03989 594 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 SNX17Q15036 470 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 PCBP1Q15365 356 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 KYAT1Q16773 422 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 CCSAPQ6IQ19 270 aaPredicted RBP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 NOTUMQ6P988 496 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 ACRBPQ8NEB7 543 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 TAS1R2Q8TE23 839 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 NT5C1BQ96P26 610 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 NHEJ1Q9H9Q4 299 aaPredicted RBP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 KCND1Q9NSA2 647 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 DNAJC12Q9UKB3 198 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 TRPV2Q9Y5S1 764 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.61
LINC00173-203ENST00000480237 ZNF638Q14966 1978 aaKnown RBP11.27□□□□□ -0.61
LINC00173-203ENST00000480237 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
LINC00173-203ENST00000480237 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
LINC00173-203ENST00000480237 F8VZ95 297 aa11.26□□□□□ -0.61
LINC00173-203ENST00000480237 AKR1B10O60218 316 aa11.26□□□□□ -0.61
LINC00173-203ENST00000480237 NDUFA10O95299 355 aa11.26□□□□□ -0.61
LINC00173-203ENST00000480237 NPTXRO95502 500 aa11.26□□□□□ -0.61
LINC00173-203ENST00000480237 HLA-DRAP01903 254 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms