RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 PTGFRNQ9P2B2 879 aa5.76□□□□□ -1.49
ITGB1-212ENST00000480226 COL4A3BPQ9Y5P4 624 aa5.76□□□□□ -1.49
ITGB1-212ENST00000480226 NOX1Q9Y5S8 564 aa5.76□□□□□ -1.49
ITGB1-212ENST00000480226 MARCH11A6NNE9 402 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 CDKL5O76039 1030 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 POMCP01189 267 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 RAP2AP10114 183 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 EGR2P11161 476 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-212ENST00000480226 SREBF1P36956 1147 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 MTNR1BP49286 362 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 KLF1Q13351 362 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-212ENST00000480226 AFMIDQ63HM1 303 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 ADGRG3Q86Y34 549 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 MAPKAPK5Q8IW41 473 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 TMEM132CQ8N3T6 1108 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 ASB10Q8WXI3 467 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 FUBP3Q96I24 572 aaKnown RBP eCLIP5.75□□□□□ -1.49
ITGB1-212ENST00000480226 ADI1Q9BV57 179 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 SENP6Q9GZR1 1112 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-212ENST00000480226 PUS7LQ9H0K6 701 aaKnown RBP5.75□□□□□ -1.49
ITGB1-212ENST00000480226 LANCL2Q9NS86 450 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 KLHL11Q9NVR0 708 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 ATRNL1Q5VV63 1379 aa5.75□□□□□ -1.49
ITGB1-212ENST00000480226 PNPLA7Q6ZV29 1317 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 FZD9O00144 591 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 WNT10BO00744 389 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 KATNA1O75449 491 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 ENDOD1O94919 500 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 HMGB1P09429 215 aaKnown RBP5.74□□□□□ -1.49
ITGB1-212ENST00000480226 ITGAMP11215 1152 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 ATP5JP18859 108 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 IARSP41252 1262 aaKnown RBP5.74□□□□□ -1.49
ITGB1-212ENST00000480226 PPP3CAQ08209 521 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 FBXO18Q8NFZ0 1043 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 SLC9A6Q92581 669 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 VOPP1Q96AW1 172 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 FAM30AQ9NZY2 134 aa5.74□□□□□ -1.49
ITGB1-212ENST00000480226 ESRRBO95718 433 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 OSMP13725 252 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 CXCR5P32302 372 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 SLC5A3P53794 718 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 FOXI1Q12951 378 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 MALLQ13021 153 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 MPP3Q13368 585 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 FAM50AQ14320 339 aaKnown RBP5.73□□□□□ -1.49
ITGB1-212ENST00000480226 NOMO1Q15155 1222 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 CCDC142Q17RM4 750 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 OTUD7BQ6GQQ9 843 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 ZNF764Q96H86 408 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-212ENST00000480226 PUS7Q96PZ0 661 aaKnown RBP5.73□□□□□ -1.49
ITGB1-212ENST00000480226 SLC2A13Q96QE2 648 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 ALOXE3Q9BYJ1 711 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 RNPEPQ9H4A4 650 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 ZNF277Q9NRM2 450 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-212ENST00000480226 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 DNAJC28Q9NX36 388 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 TESQ9UGI8 421 aaKnown RBP5.73□□□□□ -1.49
ITGB1-212ENST00000480226 TRHDEQ9UKU6 1024 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 INSL6Q9Y581 213 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 COL11A2P13942 1736 aaPredicted RBP5.73□□□□□ -1.49
ITGB1-212ENST00000480226 WASHC2CQ9Y4E1 1318 aa5.73□□□□□ -1.49
ITGB1-212ENST00000480226 A0A1B0GTW7 788 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 TRIM75PA6NK02 468 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 GABRDO14764 452 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 TEX33O43247 280 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA12O60330 932 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 ELANEP08246 267 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
ITGB1-212ENST00000480226 CD38P28907 300 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 GUCY1A2P33402 732 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 MCAMP43121 646 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 MRPS21P82921 87 aaKnown RBP5.72□□□□□ -1.49
ITGB1-212ENST00000480226 UBXN2BQ14CS0 331 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PRR16Q569H4 304 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 SYCE2Q6PIF2 218 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 C1orf162Q8NEQ5 155 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-212ENST00000480226 CASKIN2Q8WXE0 1202 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 STON2Q8WXE9 905 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 HOXB13Q92826 284 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-212ENST00000480226 CYFIP2Q96F07 1278 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 BBC3Q96PG8 261 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-212ENST00000480226 DMRT3Q9NQL9 472 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA9Q9Y5G4 932 aaKnown RBP5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA8Q9Y5G5 932 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA7Q9Y5G6 932 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA6Q9Y5G7 932 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA3Q9Y5H0 932 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 PCDHGA2Q9Y5H1 932 aa5.72□□□□□ -1.49
ITGB1-212ENST00000480226 TYRP1P17643 537 aa5.71□□□□□ -1.5
ITGB1-212ENST00000480226 AGXTP21549 392 aa5.71□□□□□ -1.5
ITGB1-212ENST00000480226 FDXRP22570 491 aa5.71□□□□□ -1.5
ITGB1-212ENST00000480226 CLK3P49761 638 aaKnown RBP5.71□□□□□ -1.5
ITGB1-212ENST00000480226 SYDE2Q5VT97 1194 aa5.71□□□□□ -1.5
ITGB1-212ENST00000480226 B3GNTL1Q67FW5 361 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-212ENST00000480226 FOXR2Q6PJQ5 311 aa5.71□□□□□ -1.5
ITGB1-212ENST00000480226 CAGE1Q8TC20 777 aa5.71□□□□□ -1.5
ITGB1-212ENST00000480226 RNF31Q96EP0 1072 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms