RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 RAB24Q969Q5 203 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 TMX3Q96JJ7 454 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 HEPHQ9BQS7 1158 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 PYM1Q9BRP8 204 aaKnown RBP7.2□□□□□ -1.26
PBRM1-220ENST00000480064 ALG13Q9NP73 1137 aaKnown RBP7.2□□□□□ -1.26
PBRM1-220ENST00000480064 HELLSQ9NRZ9 838 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 TM7SF3Q9NS93 570 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 BTBD7Q9P203 1132 aa7.2□□□□□ -1.26
PBRM1-220ENST00000480064 ANKRD18BA2A2Z9 1011 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 PODXLO00592 558 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 POLBP06746 335 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 APEX1P27695 318 aaKnown RBP7.19□□□□□ -1.26
PBRM1-220ENST00000480064 ECHS1P30084 290 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 SERPINF1P36955 418 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 CLNS1AP54105 237 aaKnown RBP7.19□□□□□ -1.26
PBRM1-220ENST00000480064 PER3P56645 1201 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 PPP3CAQ08209 521 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 NFATC3Q12968 1075 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 SKIDA1Q1XH10 827 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 LCE4AQ5TA78 99 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 ITPRIPL1Q6GPH6 555 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 GPR156Q8NFN8 814 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 OR6B3Q8NGW1 331 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 VRK1Q99986 396 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-220ENST00000480064 NUDT16L1Q9BRJ7 211 aaKnown RBP7.19□□□□□ -1.26
PBRM1-220ENST00000480064 PDGFDQ9GZP0 370 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-220ENST00000480064 PITHD1Q9GZP4 211 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-220ENST00000480064 INCENPQ9NQS7 918 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 KCMF1Q9P0J7 381 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 PCDHA6Q9UN73 950 aa7.19□□□□□ -1.26
PBRM1-220ENST00000480064 A6NLC8 198 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 NPC1O15118 1278 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 ANP32CO43423 234 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 ANXA2P07355 339 aaKnown RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 MYL4P12829 197 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 RAC2P15153 192 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 PRKCAP17252 672 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 SYN1P17600 705 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 CFPP27918 469 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 PAPOLAP51003 745 aaKnown RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 GALK1P51570 392 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 MEF2AQ02078 507 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 SPARCL1Q14515 664 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 C3orf38Q5JPI3 329 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 AGAP9Q5VTM2 703 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 OR8H2Q8N162 312 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 ANKS4BQ8N8V4 417 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 FBXO15Q8NCQ5 510 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 ARRDC4Q8NCT1 418 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 C18orf8Q96DM3 657 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 DIRC2Q96SL1 478 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 UHRF1Q96T88 793 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 NSUN3Q9H649 340 aaKnown RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 BRD9Q9H8M2 597 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-220ENST00000480064 CALCOCO1Q9P1Z2 691 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 MAN2B2Q9Y2E5 1009 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 TTLL3Q9Y4R7 772 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
PBRM1-220ENST00000480064 A0A0A6YYJ9 748 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 PRAMEF4O60810 478 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 PHF2O75151 1096 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 SOAT2O75908 522 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 KCNJ5P48544 419 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 RPS16P62249 146 aaKnown RBP7.17□□□□□ -1.26
PBRM1-220ENST00000480064 MVKQ03426 396 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 MAP3K12Q12852 859 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 FBXO47Q5MNV8 452 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 JMJD6Q6NYC1 403 aaPredicted RBP7.17□□□□□ -1.26
PBRM1-220ENST00000480064 ZNF783Q6ZMS7 281 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 FASTKD5Q7L8L6 764 aaKnown RBP7.17□□□□□ -1.26
PBRM1-220ENST00000480064 C2CD5Q86YS7 1000 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 TMTC1Q8IUR5 882 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 CCDC150Q8NCX0 1101 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 OR10H5Q8NGA6 315 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 IPCEF1Q8WWN9 437 aaPredicted RBP7.17□□□□□ -1.26
PBRM1-220ENST00000480064 PEX11GQ96HA9 241 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 SNX22Q96L94 193 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 PLEKHA5Q9HAU0 1116 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 RIC8AQ9NPQ8 531 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 TMEM59LQ9UK28 342 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 DBR1Q9UK59 544 aaKnown RBP7.17□□□□□ -1.26
PBRM1-220ENST00000480064 WASF3Q9UPY6 502 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 SIT1Q9Y3P8 196 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 PCDHA1Q9Y5I3 950 aa7.17□□□□□ -1.26
PBRM1-220ENST00000480064 NFIBO00712 420 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 SGSM2O43147 1006 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 ORC4O43929 436 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 TBC1D4O60343 1298 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 CUTAO60888 179 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 TBX18O95935 607 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 MSL3P1P0C860 447 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 C1QTNF9P0C862 333 aa7.16□□□□□ -1.26
PBRM1-220ENST00000480064 GLI4P10075 376 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms