RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 DGKDQ16760 1214 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 SYCP2LQ5T4T6 812 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 USP45Q70EL2 814 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 CXXC5Q7LFL8 322 aaKnown RBP6.64□□□□□ -1.35
UPF3A-205ENST00000479712 B3GNT8Q7Z7M8 397 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 SAPCD2Q86UD0 394 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 STK32CQ86UX6 486 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 GRAMD1CQ8IYS0 662 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 DIS3LQ8TF46 1054 aaKnown RBP6.64□□□□□ -1.35
UPF3A-205ENST00000479712 FAM168AQ92567 244 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 LIN37Q96GY3 246 aaPredicted RBP6.64□□□□□ -1.35
UPF3A-205ENST00000479712 WRNIP1Q96S55 665 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 SARGQ9BW04 601 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 MTMR10Q9NXD2 777 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 HACL1Q9UJ83 578 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 SYNPO2Q9UMS6 1093 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 DNM3Q9UQ16 869 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 RNF123Q5XPI4 1314 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 KIAA0100Q14667 2235 aaKnown RBP6.64□□□□□ -1.35
UPF3A-205ENST00000479712 ZNF503-AS2A6NEH8 195 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 TPD52L2O43399 206 aaKnown RBP6.63□□□□□ -1.35
UPF3A-205ENST00000479712 PEX10O60683 326 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 PAPLNO95428 1278 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 NRG3P56975 720 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 BIRC2Q13490 618 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 LAMA3Q16787 3333 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 MUM1L1Q5H9M0 696 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 FBXO46Q6PJ61 603 aaPredicted RBP6.63□□□□□ -1.35
UPF3A-205ENST00000479712 BTNL9Q6UXG8 535 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 GLB1L2Q8IW92 636 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 TTC17Q96AE7 1141 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 MVB12AQ96EY5 273 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 DIRC2Q96SL1 478 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 ACO2Q99798 780 aaKnown RBP6.63□□□□□ -1.35
UPF3A-205ENST00000479712 GORASP1Q9BQQ3 440 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 ADI1Q9BV57 179 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 EPB41L4BQ9H329 900 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 NSUN3Q9H649 340 aaKnown RBP6.63□□□□□ -1.35
UPF3A-205ENST00000479712 MAN1C1Q9NR34 630 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 KCND1Q9NSA2 647 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.63□□□□□ -1.35
UPF3A-205ENST00000479712 SAGE1Q9NXZ1 904 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 MBD1Q9UIS9 605 aaPredicted RBP6.63□□□□□ -1.35
UPF3A-205ENST00000479712 PCDHA5Q9Y5H7 936 aa6.63□□□□□ -1.35
UPF3A-205ENST00000479712 PALLDQ8WX93 1383 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 NBPF7P0C2Y1 421 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 MYBP10242 640 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 ADCY8P40145 1251 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 NOGQ13253 232 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 BRD3Q15059 726 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 GRAMD4Q6IC98 578 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 LMBR1LQ6UX01 489 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 OTOP2Q7RTS6 562 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 CAMKK1Q8N5S9 505 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 ZBTB34Q8NCN2 500 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 MZB1Q8WU39 189 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 NRG4Q8WWG1 115 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 DYDC2Q96IM9 177 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 RPS6KC1Q96S38 1066 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 C11orf84Q9BUA3 381 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 HAPLN2Q9GZV7 340 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 PRO3102Q9H379 93 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 DCP1AQ9NPI6 582 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 CHST12Q9NRB3 414 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 POLR3BQ9NW08 1133 aaPredicted RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 MAGEL2Q9UJ55 1249 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 LIMCH1Q9UPQ0 1083 aa6.62□□□□□ -1.35
UPF3A-205ENST00000479712 RBBP6Q7Z6E9 1792 aaKnown RBP6.62□□□□□ -1.35
UPF3A-205ENST00000479712 CPSF1Q10570 1443 aaKnown RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 NSD3Q9BZ95 1437 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 ZNF541Q9H0D2 1346 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 AKAP11Q9UKA4 1901 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 TEX51A0A1B0GUA7 166 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 MYOCOSA0A1B0GUC4 107 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 CCDC154A6NI56 674 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 HTRA2O43464 458 aaPredicted RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 SEC24DO94855 1032 aaPredicted RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 CELF2O95319 508 aaKnown RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 MCAMP43121 646 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 TMF1P82094 1093 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 MGAT5Q09328 741 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 GALEQ14376 348 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 RTP5Q14D33 572 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 PGS1Q32NB8 556 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 COBLL1Q53SF7 1204 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 KLHDC10Q6PID8 442 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 PRR18Q8N4B5 295 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 PJA1Q8NG27 643 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 C1GALT1C1Q96EU7 318 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 PAWRQ96IZ0 340 aaKnown RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 P2RX7Q99572 595 aaKnown RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 FDXACB1Q9BRP7 624 aaPredicted RBP6.61□□□□□ -1.35
UPF3A-205ENST00000479712 ZNF700Q9H0M5 742 aa6.61□□□□□ -1.35
UPF3A-205ENST00000479712 GREM2Q9H772 168 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms