RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 IFT74Q96LB3 600 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 BCO2Q9BYV7 579 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 TMEM134Q9H6X4 195 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 DNMT3BQ9UBC3 853 aaKnown RBP14.64□□□□□ -0.07
ABCF1-206ENST00000479542 TNFSF13BQ9Y275 285 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 A0A087WWV3 80 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 ADAM12O43184 909 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 TBC1D4O60343 1298 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 MCM7P33993 719 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 GRM5P41594 1212 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 PUM1Q14671 1186 aaKnown RBP eCLIP14.63□□□□□ -0.07
ABCF1-206ENST00000479542 PABPC1LQ4VXU2 614 aaKnown RBP14.63□□□□□ -0.07
ABCF1-206ENST00000479542 MAEAQ7L5Y9 396 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 NPAS3Q8IXF0 933 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 KCTD17Q8N5Z5 321 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 ITFG1Q8TB96 612 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 SLC7A14Q8TBB6 771 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 LLPHQ9BRT6 129 aaKnown RBP14.63□□□□□ -0.07
ABCF1-206ENST00000479542 IER2Q9BTL4 223 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 FAM126AQ9BYI3 521 aaPredicted RBP14.63□□□□□ -0.07
ABCF1-206ENST00000479542 C17orf75Q9HAS0 396 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 PTPRHQ9HD43 1115 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 TRPV5Q9NQA5 729 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 TOPORSQ9NS56 1045 aaPredicted RBP14.63□□□□□ -0.07
ABCF1-206ENST00000479542 SLC38A7Q9NVC3 462 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 DLL3Q9NYJ7 618 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 KCNG1Q9UIX4 513 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 PCDHGA2Q9Y5H1 932 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.63□□□□□ -0.07
ABCF1-206ENST00000479542 R4GN57 208 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 DNAH14Q0VDD8 3507 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 NOTCH4Q99466 2003 aa14.63□□□□□ -0.07
ABCF1-206ENST00000479542 VWA8A3KMH1 1905 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 SMIM28A0A1B0GU29 152 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 K7ERI5 159 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 SYN3O14994 580 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 CCL16O15467 120 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
ABCF1-206ENST00000479542 LARGE1O95461 756 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 ATF2P15336 505 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 SDHBP21912 280 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 CLCNKBP51801 687 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 SNW1Q13573 536 aaKnown RBP14.62□□□□□ -0.07
ABCF1-206ENST00000479542 MRPL58Q14197 206 aaKnown RBP14.62□□□□□ -0.07
ABCF1-206ENST00000479542 ZBTB41Q5SVQ8 909 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 NT5DC1Q5TFE4 455 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 ATF7IP2Q5U623 682 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 EEF1DP3Q658K8 133 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 TCEAL8Q8IYN2 117 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 ZBTB44Q8NCP5 570 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 HASPINQ8TF76 798 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 DNASE1L2Q92874 299 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 ELSPBP1Q96BH3 223 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 LTB4R2Q9NPC1 389 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 CACNG4Q9UBN1 327 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
ABCF1-206ENST00000479542 MYH15Q9Y2K3 1946 aa14.62□□□□□ -0.07
ABCF1-206ENST00000479542 ZNF197O14709 1029 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 LAMTOR5O43504 91 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 EDN1P05305 212 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 RHOP08100 348 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 KCNE1P15382 129 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 PTPN2P17706 415 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 RPL9P32969 192 aaKnown RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 YARSP54577 528 aaKnown RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 MLLT6P55198 1093 aaPredicted RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 NTHL1P78549 312 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 TMEM132AQ24JP5 1023 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 SPECC1Q5M775 1068 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 TPGS2Q68CL5 300 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 C4orf32Q8N8J7 132 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 RMDN1Q96DB5 314 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 ACO2Q99798 780 aaKnown RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 NTPCRQ9BSD7 190 aaKnown RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 CCDC94Q9BW85 323 aaPredicted RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 FOXQ1Q9C009 403 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 CXCL16Q9H2A7 254 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 MRPS17Q9Y2R5 130 aaKnown RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 MRPS23Q9Y3D9 190 aaKnown RBP14.61□□□□□ -0.07
ABCF1-206ENST00000479542 CDY1Q9Y6F8 540 aa14.61□□□□□ -0.07
ABCF1-206ENST00000479542 WDR87Q6ZQQ6 2873 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 FAM170BA6NMN3 283 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 H7C4K7 107 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 JAK2O60674 1132 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 LILRB5O75023 590 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 PROZP22891 400 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 NEK4P51957 841 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 IGSF22Q8N9C0 903 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 LEMD2Q8NC56 503 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 FBXO18Q8NFZ0 1043 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 KCNN1Q92952 543 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 TIPINQ9BVW5 301 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 RAB34Q9BZG1 259 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 BHMT2Q9H2M3 363 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 ZSCAN32Q9NX65 697 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 ARHGAP28Q9P2N2 729 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 POLIQ9UNA4 740 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 GDAQ9Y2T3 454 aa14.6□□□□□ -0.07
ABCF1-206ENST00000479542 MIA3Q5JRA6 1907 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms