RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 MICALL1Q8N3F8 863 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 MICAL1Q8TDZ2 1067 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 BCL7CQ8WUZ0 217 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 POMGNT1Q8WZA1 660 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 CCDC47Q96A33 483 aaKnown RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 ZMAT2Q96NC0 199 aaKnown RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 HERC2P3Q9BVR0 1158 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 GTPBP4Q9BZE4 634 aaKnown RBP16.85■□□□□ 0.29
C9orf3-217ENST00000479161 BLZF1Q9H2G9 400 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 MUC3AQ02505 3323 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 XIRP2A4UGR9 3374 aa16.85■□□□□ 0.29
C9orf3-217ENST00000479161 C2orf71A6NGG8 1288 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
C9orf3-217ENST00000479161 RHOBTB3O94955 611 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 LRPAP1P30533 357 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 HOXD13P35453 343 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 OSTNP61366 133 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 PPP2R3AQ06190 1150 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 GOLGA5Q8TBA6 731 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 TLE6Q9H808 572 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 UBE2ZQ9H832 354 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-217ENST00000479161 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 UBQLN1Q9UMX0 589 aaKnown RBP16.84■□□□□ 0.29
C9orf3-217ENST00000479161 C2CD2Q9Y426 696 aa16.84■□□□□ 0.29
C9orf3-217ENST00000479161 SF3B1O75533 1304 aaKnown RBP eCLIP16.84■□□□□ 0.293e-6■■■■■ 136.2
C9orf3-217ENST00000479161 TRAPPC3O43617 180 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 TADA2AO75478 443 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 KIF20AO95235 890 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 IL18RAPO95256 599 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 CXCL14O95715 111 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 RPN1P04843 607 aaKnown RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 CXCL8P10145 99 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 MRPS5P82675 430 aaKnown RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 DSG1Q02413 1049 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 KNOP1Q1ED39 458 aaKnown RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 USP41Q3LFD5 358 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 PUS10Q3MIT2 529 aaKnown RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 KMT5BQ4FZB7 885 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 KIAA0319Q5VV43 1072 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 FUT10Q6P4F1 479 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 PDXDC1Q6P996 788 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 PPFIBP1Q86W92 1011 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 SPATA20Q8TB22 786 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 FBXL18Q96ME1 805 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 RXFP1Q9HBX9 757 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 MRPL17Q9NRX2 175 aaKnown RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 EXOC1Q9NV70 894 aa16.83■□□□□ 0.28
C9orf3-217ENST00000479161 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 PRG3Q9Y2Y8 225 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-217ENST00000479161 LACTBL1A8MY62 500 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 TGFB1I1O43294 461 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 EXTL3O43909 919 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 HARSP12081 509 aaKnown RBP16.82■□□□□ 0.28
C9orf3-217ENST00000479161 CASP1P29466 404 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 TNFSF9P41273 254 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 CREMQ03060 361 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 MYBPC2Q14324 1141 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 SKIV2LQ15477 1246 aaKnown RBP16.82■□□□□ 0.28
C9orf3-217ENST00000479161 PTPN14Q15678 1187 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 LEXMQ3ZCV2 418 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 GLRA4Q5JXX5 417 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 HS2ST1Q7LGA3 356 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 ADGRD2Q7Z7M1 963 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 GRAMD1CQ8IYS0 662 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 HPS3Q969F9 1004 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
C9orf3-217ENST00000479161 GSDMAQ96QA5 445 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 PAAF1Q9BRP4 392 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 FNIP2Q9P278 1114 aa16.82■□□□□ 0.28
C9orf3-217ENST00000479161 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
C9orf3-217ENST00000479161 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 HIDE1A8MVS5 230 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 TISP43B9A030 160 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 B3GAT3O94766 335 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 KIF4AO95239 1232 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 URODP06132 367 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 LTBRP36941 435 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 NRIP1P48552 1158 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 GLUD2P49448 558 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 ACOT2P49753 483 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 CLCNKBP51801 687 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-217ENST00000479161 STK4Q13043 487 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SURF1Q15526 300 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SEZ6Q53EL9 994 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SPATA1Q5VX52 437 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 PLPP4Q5VZY2 271 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 ARMCX5Q6P1M9 558 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SLC9A9Q8IVB4 645 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms