RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 DENND2CQ68D51 928 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 POTEAQ6S8J7 498 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 ASAP3Q8TDY4 903 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 TMEM174Q8WUU8 243 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 IWS1Q96ST2 819 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 NTPCRQ9BSD7 190 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 TAOK3Q9H2K8 898 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 R3HDMLQ9H3Y0 253 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 APOBEC3GQ9HC16 384 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 ANKFY1Q9P2R3 1169 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 PCYOX1Q9UHG3 505 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 A6NNZ2 444 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 MTA2O94776 668 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 VNN1O95497 513 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 CREB1P16220 341 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 MAPK4P31152 587 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 RWDD2BP57060 319 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 DRP2Q13474 957 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 LRRC14Q15048 493 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 TUBB8Q3ZCM7 444 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 AGBL2Q5U5Z8 902 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 ZNF668Q96K58 619 aaPredicted RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 TARS2Q9BW92 718 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 ADAM7Q9H2U9 754 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 SLC9A2Q9UBY0 812 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 MYPNQ86TC9 1320 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 ACSL3O95573 720 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 HLA-DRAP01903 254 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 UNGP13051 313 aaPredicted RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 TCF4P15884 667 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 DSG3P32926 999 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 LIG4P49917 911 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 TCEAL1Q15170 157 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 LONRF1Q17RB8 773 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 ATP13A4Q4VNC1 1196 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 C6orf89Q6UWU4 347 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 CRELD2Q6UXH1 353 aaPredicted RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 SEPT14Q6ZU15 432 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 CCDC121Q6ZUS5 278 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 MICALCLQ6ZW33 695 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 FMNL3Q8IVF7 1028 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 MCOLN2Q8IZK6 566 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 CNPY4Q8N129 248 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 SAMD3Q8N6K7 520 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 OR5B17Q8NGF7 314 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 KIFAP3Q92845 792 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 PRMT1Q99873 361 aaKnown RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 AAASQ9NRG9 546 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 CYP39A1Q9NYL5 469 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 PIM2Q9P1W9 311 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 RGS17Q9UGC6 210 aaPredicted RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 USTQ9Y2C2 406 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 LRRIQ4A6NIV6 560 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 HGSO14964 777 aaPredicted RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 TAS2R40P59535 323 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 ZNF280AP59817 542 aaPredicted RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 PPP1R7Q15435 360 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 ANGEL2Q5VTE6 544 aaKnown RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 EEPD1Q7L9B9 569 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 NSUN6Q8TEA1 469 aaKnown RBP11.55□□□□□ -0.56
VPS52-217ENST00000478934 SPIRE2Q8WWL2 714 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 HAUS2Q9NVX0 235 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 CTNNAL1Q9UBT7 734 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
VPS52-217ENST00000478934 PMM2O15305 246 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 FSBPO95073 299 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 PSAPP07602 524 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 KRT17Q04695 432 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 ADCY2Q08462 1091 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 SGO2Q562F6 1265 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 FAM182AQ5T1J6 154 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 TMEM270Q6UE05 265 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 ATP6V0A1Q93050 837 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 GPRASP2Q96D09 838 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 CCDC114Q96M63 670 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 XPO6Q96QU8 1125 aaKnown RBP11.54□□□□□ -0.56
VPS52-217ENST00000478934 JPH2Q9BR39 696 aaPredicted RBP11.54□□□□□ -0.56
VPS52-217ENST00000478934 ATP6V0A4Q9HBG4 840 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 ARHGAP28Q9P2N2 729 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 FBXO40Q9UH90 709 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 RGS16O15492 202 aaPredicted RBP11.54□□□□□ -0.56
VPS52-217ENST00000478934 RIPK2O43353 540 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 DGAT1O75907 488 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 GLRA2P23416 452 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 PIK3CAP42336 1068 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 SSR1P43307 286 aaKnown RBP11.54□□□□□ -0.56
VPS52-217ENST00000478934 POLGP54098 1239 aaPredicted RBP11.54□□□□□ -0.56
VPS52-217ENST00000478934 ACTN3Q08043 901 aaPredicted RBP11.54□□□□□ -0.56
VPS52-217ENST00000478934 TNFAIP1Q13829 316 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 EMC2Q15006 297 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 C15orf39Q6ZRI6 1047 aa11.54□□□□□ -0.56
VPS52-217ENST00000478934 SCYL3Q8IZE3 742 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms