RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, human

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VLDLR-204	ENST00000478776	MICALCL	Q6ZW33	695 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	BHLHA9	Q7RTU4	235 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	FAM43A	Q8N2R8	423 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	CLRN3	Q8NCR9	226 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	SLC35B2	Q8TB61	432 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	WDR66	Q8TBY9	1149 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	NEU1	Q99519	415 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	KCTD10	Q9H3F6	313 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	RNPEP	Q9H4A4	650 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	GALNT9	Q9HCQ5	603 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	VTA1	Q9NP79	307 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	SEMA4G	Q9NTN9	838 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	KLHL11	Q9NVR0	708 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	APOBEC2	Q9Y235	224 aa	Known RBP	4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	ATP8A1	Q9Y2Q0	1164 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	COL4A3BP	Q9Y5P4	624 aa		4.57	□□□□□ -1.68
VLDLR-204	ENST00000478776	PHLDB1	Q86UU1	1377 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776		A0A1B0GTW7	788 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	CXorf49	A8MYA2	514 aa	Predicted RBP	4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	GPR39	O43194	453 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	AKR1B10	O60218	316 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	MATN4	O95460	622 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	CACNA2D1	P54289	1103 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	EVA1C	P58658	441 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	NHLH1	Q02575	133 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	PTPRO	Q16827	1216 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	AKNAD1	Q5T1N1	836 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	RASSF3	Q86WH2	238 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	LYSMD2	Q8IV50	215 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	DRC7	Q8IY82	874 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	ACTRT2	Q8TDY3	377 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	COG1	Q8WTW3	980 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	GPATCH3	Q96I76	525 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	BOD1	Q96IK1	185 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	UHRF1	Q96T88	793 aa	Predicted RBP	4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	ZSWIM1	Q9BR11	485 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	AIFM2	Q9BRQ8	373 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	PCDH12	Q9NPG4	1184 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	SLC17A6	Q9P2U8	582 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	RNF7	Q9UBF6	113 aa		4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	SETD1B	Q9UPS6	1966 aa	Known RBP	4.56	□□□□□ -1.68
VLDLR-204	ENST00000478776	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	ULK1	O75385	1050 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	GPANK1	O95872	356 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	ADSL	P30566	484 aa	Predicted RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	CDKN1C	P49918	316 aa	Predicted RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	PER3	P56645	1201 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	SESN3	P58005	492 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	CXADR	P78310	365 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	PDCD1	Q15116	288 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	UGT8	Q16880	541 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	CT83	Q5H943	113 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	PITRM1	Q5JRX3	1037 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	SLC41A1	Q8IVJ1	513 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	CMIP	Q8IY22	773 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	SRRM1	Q8IYB3	904 aa	Known RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	REPS2	Q8NFH8	660 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	PTCD3	Q96EY7	689 aa	Known RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	MCM8	Q9UJA3	840 aa		4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	MTO1	Q9Y2Z2	717 aa	Known RBP	4.55	□□□□□ -1.68
VLDLR-204	ENST00000478776	ADCY6	O43306	1168 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	ORC4	O43929	436 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	ERN1	O75460	977 aa	Known RBP	4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	RBMXL2	O75526	392 aa	Known RBP	4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	PRKD3	O94806	890 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	POMC	P01189	267 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	ELANE	P08246	267 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	RAP2A	P10114	183 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	CDK11B	P21127	795 aa	Known RBP	4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	OCA2	Q04671	838 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	SCAP	Q12770	1279 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	RNF219	Q5W0B1	726 aa	Predicted RBP	4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	SPATS2	Q86XZ4	545 aa	Known RBP	4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	EAF2	Q96CJ1	260 aa	Predicted RBP	4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	PRDM12	Q9H4Q4	367 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	MOCS1	Q9NZB8	636 aa		4.54	□□□□□ -1.68
VLDLR-204	ENST00000478776	LRRC3C	A6NJW4	275 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	PROP1	O75360	226 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	ATP5J	P18859	108 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	FGFR4	P22455	802 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	ECHS1	P30084	290 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	HSD11B2	P80365	405 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	SRSF4	Q08170	494 aa	Known RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	FOXF2	Q12947	444 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	FAM50A	Q14320	339 aa	Known RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	GJC2	Q5T442	439 aa	Predicted RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	COLGALT2	Q8IYK4	626 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	TRMT2A	Q8IZ69	625 aa	Known RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	PRPF38A	Q8NAV1	312 aa	Known RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	OR7D4	Q8NG98	312 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	RIN2	Q8WYP3	895 aa	Predicted RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	MRI1	Q9BV20	369 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	KLK15	Q9H2R5	256 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	BCO1	Q9HAY6	547 aa		4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	ALG13	Q9NP73	1137 aa	Known RBP	4.53	□□□□□ -1.68
VLDLR-204	ENST00000478776	KMT5A	Q9NQR1	393 aa		4.53	□□□□□ -1.68

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