RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC30A4O14863 429 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 N4BP3O15049 544 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 RETP07949 1114 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 TDGF1P13385 188 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 NAB2Q15742 525 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 TMEM132AQ24JP5 1023 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 POTEHQ6S545 545 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 PRR23BQ6ZRT6 265 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 RUFY3Q7L099 469 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 LARP6Q9BRS8 491 aaKnown RBP18.98■□□□□ 0.63
VIM-204ENST00000478746 CXCL16Q9H2A7 254 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 LMAN1LQ9HAT1 526 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 ZFP14Q9HCL3 533 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 AVENQ9NQS1 362 aaPredicted RBP18.98■□□□□ 0.63
VIM-204ENST00000478746 PCDHA12Q9UN75 941 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 VWA8A3KMH1 1905 aa18.98■□□□□ 0.63
VIM-204ENST00000478746 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.97■□□□□ 0.63
VIM-204ENST00000478746 LRP3O75074 770 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 RECQL4O94761 1208 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 B3GAT3O94766 335 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 CEBPBP17676 345 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 XBP1P17861 261 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 RARRES1P49788 294 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 STK3Q13188 491 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 GRM2Q14416 872 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 MAEAQ7L5Y9 396 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 ZBTB8OSQ8IWT0 167 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 ZNF687Q8N1G0 1237 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 PIGOQ8TEQ8 1089 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 IER2Q9BTL4 223 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 TRMT61BQ9BVS5 477 aaKnown RBP18.97■□□□□ 0.63
VIM-204ENST00000478746 FZD8Q9H461 694 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 BACE2Q9Y5Z0 518 aa18.97■□□□□ 0.63
VIM-204ENST00000478746 CACNA1GO43497 2377 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 A0A087WWV3 80 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 TTLL13PA6NNM8 815 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 LRG1P02750 347 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 ELF1P32519 619 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 CCR3P51677 355 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 FAM187BQ17R55 369 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 ANKS3Q6ZW76 656 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 OXER1Q8TDS5 423 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 FAM3CQ92520 227 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 IRF7Q92985 503 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 ADPGKQ9BRR6 497 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 PDZD7Q9H5P4 517 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 GPRC5CQ9NQ84 441 aa18.96■□□□□ 0.63
VIM-204ENST00000478746 TMEM189-UBE2V1I3L0A0 370 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 ZNF197O14709 1029 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 TRAPPC3O43617 180 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 USO1O60763 962 aaKnown RBP18.95■□□□□ 0.62
VIM-204ENST00000478746 XRCC6P12956 609 aaKnown RBP eCLIP18.95■□□□□ 0.62
VIM-204ENST00000478746 IGFBP6P24592 240 aaPredicted RBP18.95■□□□□ 0.62
VIM-204ENST00000478746 PRPF4BQ13523 1007 aaKnown RBP18.95■□□□□ 0.62
VIM-204ENST00000478746 SIM2Q14190 667 aaPredicted RBP18.95■□□□□ 0.62
VIM-204ENST00000478746 FAM78AQ5JUQ0 283 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 ZNF461Q8TAF7 563 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 CORO1BQ9BR76 489 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 SEMA4GQ9NTN9 838 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 GDAQ9Y2T3 454 aa18.95■□□□□ 0.62
VIM-204ENST00000478746 CFAP47Q6ZTR5 3102 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 ARHGEF37A1IGU5 675 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 PRRG1O14668 218 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 FCARP24071 287 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 TKTP29401 623 aaKnown RBP18.94■□□□□ 0.62
VIM-204ENST00000478746 CXCL12P48061 93 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 RBM25P49756 843 aaKnown RBP18.94■□□□□ 0.62
VIM-204ENST00000478746 CLCNKBP51801 687 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 EARS2Q5JPH6 523 aaKnown RBP18.94■□□□□ 0.62
VIM-204ENST00000478746 CDCA2Q69YH5 1023 aaPredicted RBP18.94■□□□□ 0.62
VIM-204ENST00000478746 TCEAL4Q96EI5 215 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 DDX27Q96GQ7 796 aaKnown RBP18.94■□□□□ 0.62
VIM-204ENST00000478746 C2orf40Q9H1Z8 148 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 ZNF334Q9HCZ1 680 aaPredicted RBP18.94■□□□□ 0.62
VIM-204ENST00000478746 GJB4Q9NTQ9 266 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 RALGAPA1Q6GYQ0 2036 aa18.94■□□□□ 0.62
VIM-204ENST00000478746 CHD6Q8TD26 2715 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 MICAL2O94851 1124 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 ATP2B1P20020 1258 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 GDI1P31150 447 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 CSRP2Q16527 193 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 MAPK6Q16659 721 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 PRSS36Q5K4E3 855 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 CD300LGQ6UXG3 332 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 PRR23CQ6ZRP0 262 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 MAP4K3Q8IVH8 894 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 MCPH1Q8NEM0 835 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 UROC1Q96N76 676 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 ASB16Q96NS5 453 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 TTC12Q9H892 705 aaPredicted RBP18.93■□□□□ 0.62
VIM-204ENST00000478746 TRPV5Q9NQA5 729 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 USP20Q9Y2K6 914 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 PIAS3Q9Y6X2 628 aa18.93■□□□□ 0.62
VIM-204ENST00000478746 I3L4J1 428 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 ACKR2O00590 384 aa18.92■□□□□ 0.62
VIM-204ENST00000478746 HRO43593 1189 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms