RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 USP41Q3LFD5 358 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 ZNF720Q7Z2F6 126 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 RNF135Q8IUD6 432 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 PDILTQ8N807 584 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 RASSF8Q8NHQ8 419 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 RIN2Q8WYP3 895 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-212ENST00000478616 STAMQ92783 540 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 ACAP3Q96P50 834 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 TCHPQ9BT92 498 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 DAXXQ9UER7 740 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-212ENST00000478616 CCDC39Q9UFE4 941 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 KCNG1Q9UIX4 513 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 SCN1AP35498 2009 aa20.52■□□□□ 0.88
SREBF1-212ENST00000478616 TSC2P49815 1807 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 A0A0B4J269 797 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 MYBP10242 640 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 FGFR3P22607 806 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 DNM1Q05193 864 aaKnown RBP20.51■□□□□ 0.87
SREBF1-212ENST00000478616 SPAG1Q07617 926 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
SREBF1-212ENST00000478616 FAM171A1Q5VUB5 890 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 GLIS3Q8NEA6 775 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 PIK3R5Q8WYR1 880 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 ZNF396Q96N95 335 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-212ENST00000478616 EMILIN2Q9BXX0 1053 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 ZHX3Q9H4I2 956 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 DZANK1Q9NVP4 752 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 FNIP2Q9P278 1114 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 TUBGCP4Q9UGJ1 667 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 MUTYHQ9UIF7 546 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 STYXL1Q9Y6J8 313 aa20.51■□□□□ 0.87
SREBF1-212ENST00000478616 SF3B1O75533 1304 aaKnown RBP eCLIP20.51■□□□□ 0.872e-6■■■■■ 107.9
SREBF1-212ENST00000478616 FAM86C2PA6NEL3 165 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 CLDN3O15551 220 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 TGM5O43548 720 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 NR1I2O75469 434 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 RFPL2O75678 378 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 KRT18P05783 430 aaKnown RBP20.5■□□□□ 0.87
SREBF1-212ENST00000478616 SPATA31D3P0C874 917 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 ADSSP30520 456 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 BMS1Q14692 1282 aaKnown RBP20.5■□□□□ 0.87
SREBF1-212ENST00000478616 KIAA1841Q6NSI8 718 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 DCLRE1AQ6PJP8 1040 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 TMC5Q6UXY8 1006 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 SPATA31D4Q6ZUB0 917 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 GPR149Q86SP6 731 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 PPFIBP1Q86W92 1011 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 ZSWIM2Q8NEG5 633 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 ZNF707Q96C28 371 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-212ENST00000478616 RPGRIP1Q96KN7 1286 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 MAN1C1Q9NR34 630 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 RAPGEFL1Q9UHV5 662 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
SREBF1-212ENST00000478616 H0YCG3 227 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 TBCAO75347 108 aaKnown RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 SRGAP2BP0DMP2 458 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 TKTP29401 623 aaKnown RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 ITIH3Q06033 890 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 HERC4Q5GLZ8 1057 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 CRELD2Q6UXH1 353 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 SV2BQ7L1I2 683 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 APBB1IPQ7Z5R6 666 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 PALB2Q86YC2 1186 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 GLYCTKQ8IVS8 523 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 DDX27Q96GQ7 796 aaKnown RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 LRFN3Q9BTN0 628 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 TTPALQ9BTX7 342 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 KBTBD4Q9NVX7 518 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 TBC1D7Q9P0N9 293 aa20.49■□□□□ 0.87
SREBF1-212ENST00000478616 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
SREBF1-212ENST00000478616 LACTBL1A8MY62 500 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 C2CD4DB7Z1M9 353 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 HNRNPDLO14979 420 aaKnown RBP20.48■□□□□ 0.87
SREBF1-212ENST00000478616 CUTAO60888 179 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 B3GAT3O94766 335 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 ADH1AP07327 375 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 SP100P23497 879 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-212ENST00000478616 STAT6P42226 847 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 LIG4P49917 911 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 GUCY2FP51841 1108 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 YARSP54577 528 aaKnown RBP20.48■□□□□ 0.87
SREBF1-212ENST00000478616 WNT7BP56706 349 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 HPS3Q969F9 1004 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 POP1Q99575 1024 aaKnown RBP20.48■□□□□ 0.87
SREBF1-212ENST00000478616 RCOR1Q9UKL0 485 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 SSX2IPQ9Y2D8 614 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 ZNF318Q5VUA4 2279 aa20.48■□□□□ 0.87
SREBF1-212ENST00000478616 PODXLO00592 558 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 PPEF2O14830 753 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 OGTO15294 1046 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 DCXO43602 365 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 TBC1D4O60343 1298 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 GPR37L1O60883 481 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 N4BP1O75113 896 aaKnown RBP20.47■□□□□ 0.87
SREBF1-212ENST00000478616 CLTAP09496 248 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 HOXD13P35453 343 aa20.47■□□□□ 0.87
SREBF1-212ENST00000478616 PSMD5Q16401 504 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms