RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 MYBL2P10244 700 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZSCAN20P17040 1043 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 MGAT1P26572 445 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 GPR3P46089 330 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 LGALS4P56470 323 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 TAP1Q03518 808 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 CT83Q5H943 113 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 TMEM240Q5SV17 173 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 RSAD2Q8WXG1 361 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZNF764Q96H86 408 aaPredicted RBP5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 FAXDC2Q96IV6 333 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 WNT8AQ9H1J5 351 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 KCTD10Q9H3F6 313 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 GPRC5DQ9NZD1 345 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 EDARQ9UNE0 448 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 CDY2AQ9Y6F7 541 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 ARHGEF17Q96PE2 2063 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 GOLGA8AA7E2F4 631 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 TBKBP1A7MCY6 615 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 MT-CO1P00395 513 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 HLA-DOAP06340 250 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 DDX6P26196 483 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 MEF2AQ02078 507 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 TP53BP2Q13625 1128 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 LRRC41Q15345 812 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 FSCN1Q16658 493 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 PITRM1Q5JRX3 1037 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 NXNQ6DKJ4 435 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 DRICH1Q6PGQ1 229 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 BTNL9Q6UXG8 535 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 PDZD4Q76G19 769 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 PRIMA1Q86XR5 153 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 LYSMD2Q8IV50 215 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 CMIPQ8IY22 773 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 CHPFQ8IZ52 775 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 SNX33Q8WV41 574 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 SSH1Q8WYL5 1049 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 TSR2Q969E8 191 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 CEP95Q96GE4 821 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCGF6Q9BYE7 350 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 RHOBTB2Q9BYZ6 727 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 SYNPO2LQ9H987 977 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 RNF181Q9P0P0 153 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
CDC42BPA-212ENST00000478573 FBLP22087 321 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 ENPP1P22413 925 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 CTSSP25774 331 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 BMPR1AP36894 532 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 PLA2G5P39877 138 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 RECQLP46063 649 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 SCAND1P57086 179 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 RESTQ13127 1097 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCBP2Q15366 365 aaKnown RBP eCLIP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 PRAMEF14Q5SWL7 426 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 FAM102BQ5T8I3 360 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 RD3Q7Z3Z2 195 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 SLC41A1Q8IVJ1 513 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 TCEAL8Q8IYN2 117 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZNF480Q8WV37 535 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 BBC3Q96PG8 261 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZNF277Q9NRM2 450 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 ADARB2Q9NS39 739 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 CCM2LQ9NUG4 571 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 MKS1Q9NXB0 559 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZNF180Q9UJW8 692 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 MRFAP1Q9Y605 127 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 ABCC8Q09428 1581 aa5.29□□□□□ -1.56
CDC42BPA-212ENST00000478573 URB2Q14146 1524 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 SPATA31A6Q5VVP1 1343 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 ADCY6O43306 1168 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCDHGA12O60330 932 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 SNUPNO95149 360 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 HKR1P10072 659 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PTPN7P35236 360 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 CLK3P49761 638 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 CCT2P78371 535 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 MXRA7P84157 204 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 BMT2Q1RMZ1 405 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 ERCC6LQ2NKX8 1250 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 C19orf54Q5BKX5 351 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 MFSD14BQ5SR56 506 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 SYCE2Q6PIF2 218 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 AMOTL1Q8IY63 956 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 SLC44A3Q8N4M1 653 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 CPA6Q8N4T0 437 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 FBXO18Q8NFZ0 1043 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZFP28Q8NHY6 868 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 ASB10Q8WXI3 467 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 NUP88Q99567 741 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 ADAM2Q99965 735 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PNMA8BQ9ULN7 279 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 ATP11BQ9Y2G3 1177 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 LUC7L2Q9Y383 392 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCDHGA9Q9Y5G4 932 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCDHGA8Q9Y5G5 932 aa5.28□□□□□ -1.56
CDC42BPA-212ENST00000478573 PCDHGA7Q9Y5G6 932 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms