RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CLCNKBP51801 687 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 CEP57L1Q8IYX8 460 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 TMEM87AQ8NBN3 555 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 GLIS3Q8NEA6 775 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
HMGA1-206ENST00000478214 MRPL17Q9NRX2 175 aaKnown RBP17■□□□□ 0.31
HMGA1-206ENST00000478214 CHST7Q9NS84 486 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 SLC38A7Q9NVC3 462 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 CD207Q9UJ71 328 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 HPSEQ9Y251 543 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 HCFC2Q9Y5Z7 792 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
HMGA1-206ENST00000478214 SF3B1O75533 1304 aaKnown RBP eCLIP16.99■□□□□ 0.315e-6■■■■■ 33.9
HMGA1-206ENST00000478214 TTC26A0AVF1 554 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 B3GAT3O94766 335 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
HMGA1-206ENST00000478214 CNPP09543 421 aaKnown RBP16.99■□□□□ 0.31
HMGA1-206ENST00000478214 IL9P15248 144 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 ADSSP30520 456 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 DSG1Q02413 1049 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 SPAG1Q07617 926 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 CUL4BQ13620 913 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 ALCAMQ13740 583 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 ENOX2Q16206 610 aaKnown RBP16.99■□□□□ 0.31
HMGA1-206ENST00000478214 KYAT1Q16773 422 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 PUS10Q3MIT2 529 aaKnown RBP16.99■□□□□ 0.31
HMGA1-206ENST00000478214 SLFN12LQ6IEE8 588 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 KIAA1841Q6NSI8 718 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 DCLRE1AQ6PJP8 1040 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 TMEM184AQ6ZMB5 413 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 KLHL5Q96PQ7 755 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
HMGA1-206ENST00000478214 RPF1Q9H9Y2 349 aaKnown RBP16.99■□□□□ 0.31
HMGA1-206ENST00000478214 EXOC7Q9UPT5 735 aa16.99■□□□□ 0.31
HMGA1-206ENST00000478214 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 LACTBL1A8MY62 500 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 MBTPS2O43462 519 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 EPCAMP16422 314 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 ACOT2P49753 483 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 NDUFA8P51970 172 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 SMAD4Q13485 552 aaKnown RBP16.98■□□□□ 0.31
HMGA1-206ENST00000478214 UPP1Q16831 310 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 USP41Q3LFD5 358 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 FAM171A1Q5VUB5 890 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 ANKRD54Q6NXT1 300 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 CD300LGQ6UXG3 332 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 UNC13DQ70J99 1090 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 SYCP3Q8IZU3 236 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 TMEM130Q8N3G9 435 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 FSIP1Q8NA03 581 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 SMRP1Q8NCR6 262 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 C3orf58Q8NDZ4 430 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 POMGNT1Q8WZA1 660 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 PAGE5Q96GU1 130 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 UROC1Q96N76 676 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 EMILIN2Q9BXX0 1053 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 GOLPH3LQ9H4A5 285 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 PLEKHA5Q9HAU0 1116 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 TUBGCP4Q9UGJ1 667 aa16.98■□□□□ 0.31
HMGA1-206ENST00000478214 CPSF3Q9UKF6 684 aaKnown RBP16.98■□□□□ 0.31
HMGA1-206ENST00000478214 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
HMGA1-206ENST00000478214 TCF20Q9UGU0 1960 aaKnown RBP16.97■□□□□ 0.31
HMGA1-206ENST00000478214 A0A1W2PQ27 194 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 A0A1W2PQ64 194 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 A0A1W2PQD8 194 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 TMEM189-UBE2V1I3L0A0 370 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 PODXLO00592 558 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 TEX28O15482 410 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 SRGAP2BP0DMP2 458 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 KLRC2P26717 231 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 SYKP43405 635 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 PPP2R3AQ06190 1150 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 EHHADHQ08426 723 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 POSTNQ15063 836 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 RTP2Q5QGT7 225 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 FAM26FQ5R3K3 315 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 SYCE2Q6PIF2 218 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 SLC22A17Q8WUG5 538 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 RIN2Q8WYP3 895 aaPredicted RBP16.97■□□□□ 0.31
HMGA1-206ENST00000478214 CASP10Q92851 521 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 FAM212AQ96EL1 285 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 KIF12Q96FN5 646 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 DDX27Q96GQ7 796 aaKnown RBP16.97■□□□□ 0.31
HMGA1-206ENST00000478214 RXFP1Q9HBX9 757 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 SSX2IPQ9Y2D8 614 aa16.97■□□□□ 0.31
HMGA1-206ENST00000478214 I3L4J1 428 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 ADRB2P07550 413 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 HOXD13P35453 343 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 BRCC3P46736 316 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 ELAVL2Q12926 359 aaKnown RBP16.96■□□□□ 0.31
HMGA1-206ENST00000478214 SMAD2Q15796 467 aaKnown RBP16.96■□□□□ 0.31
HMGA1-206ENST00000478214 ZBTB6Q15916 424 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 CEP57Q86XR8 500 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 ZSWIM2Q8NEG5 633 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 TTPALQ9BTX7 342 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 APOL5Q9BWW9 433 aa16.96■□□□□ 0.31
HMGA1-206ENST00000478214 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
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