RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 LIN9Q5TKA1 542 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PHLDB3Q6NSJ2 640 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PARM1Q6UWI2 310 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
TRIM13-208ENST00000478111 ACO2Q99798 780 aaKnown RBP18.37■□□□□ 0.53
TRIM13-208ENST00000478111 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 MTRRQ9UBK8 725 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PCDHB6Q9Y5E3 794 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 COL4A3Q01955 1670 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PP2D1A8MPX8 630 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 STK25O00506 426 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 B3GAT3O94766 335 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 POU2F2P09086 479 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 TKTP29401 623 aaKnown RBP18.36■□□□□ 0.53
TRIM13-208ENST00000478111 MAPK7Q13164 816 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 UVSSAQ2YD98 709 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 OTOGLQ3ZCN5 2332 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 ITFG1Q8TB96 612 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 SLC7A14Q8TBB6 771 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 SNX29Q8TEQ0 813 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 FGF13Q92913 245 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 DDX27Q96GQ7 796 aaKnown RBP18.36■□□□□ 0.53
TRIM13-208ENST00000478111 CDT1Q9H211 546 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 ARHGEF3Q9NR81 526 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 NOL7Q9UMY1 257 aaKnown RBP18.36■□□□□ 0.53
TRIM13-208ENST00000478111 BACE2Q9Y5Z0 518 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 CDY1Q9Y6F8 540 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 DNAH14Q0VDD8 3507 aa18.36■□□□□ 0.53
TRIM13-208ENST00000478111 CACNA1AO00555 2505 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 PHLPP2Q6ZVD8 1323 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 I3L4J1 428 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 ABLIM1O14639 778 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 MEFVO15553 781 aaPredicted RBP18.35■□□□□ 0.53
TRIM13-208ENST00000478111 GRM5P41594 1212 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 BRCC3P46736 316 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 PEX3P56589 373 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 GPC5P78333 572 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
TRIM13-208ENST00000478111 KCNK18Q7Z418 384 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 UROC1Q96N76 676 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 ZMAT2Q96NC0 199 aaKnown RBP18.35■□□□□ 0.53
TRIM13-208ENST00000478111 MMTAG2Q9BU76 263 aaKnown RBP18.35■□□□□ 0.53
TRIM13-208ENST00000478111 RUSC1Q9BVN2 902 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 TMEM134Q9H6X4 195 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
TRIM13-208ENST00000478111 HCFC1R1Q9NWW0 138 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 ARHGAP28Q9P2N2 729 aa18.35■□□□□ 0.53
TRIM13-208ENST00000478111 DNMT3BQ9UBC3 853 aaKnown RBP18.35■□□□□ 0.53
TRIM13-208ENST00000478111 CCDC169A6NNP5 214 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 HIP1RO75146 1068 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 XYLBO75191 536 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 DCNP07585 359 aaKnown RBP18.34■□□□□ 0.53
TRIM13-208ENST00000478111 PROZP22891 400 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 CDC25AP30304 524 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 STARD6P59095 220 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 RINT1Q6NUQ1 792 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 POTEHQ6S545 545 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 C1orf186Q6ZWK4 172 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 TARS2Q9BW92 718 aaKnown RBP18.34■□□□□ 0.53
TRIM13-208ENST00000478111 POLIQ9UNA4 740 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 DNM3Q9UQ16 869 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 STK24Q9Y6E0 443 aa18.34■□□□□ 0.53
TRIM13-208ENST00000478111 TBC1D4O60343 1298 aa18.33■□□□□ 0.52
TRIM13-208ENST00000478111 GLULP15104 373 aa18.33■□□□□ 0.52
TRIM13-208ENST00000478111 OSTNP61366 133 aa18.33■□□□□ 0.52
TRIM13-208ENST00000478111 RTL10Q7L3V2 364 aa18.33■□□□□ 0.52
TRIM13-208ENST00000478111 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.52
TRIM13-208ENST00000478111 FOXQ1Q9C009 403 aa18.33■□□□□ 0.52
TRIM13-208ENST00000478111 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.33■□□□□ 0.52
TRIM13-208ENST00000478111 SIT1Q9Y3P8 196 aa18.33■□□□□ 0.52
TRIM13-208ENST00000478111 TRAPPC3O43617 180 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 ABLIM3O94929 683 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 KCNE1P15382 129 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 PRPHP41219 470 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 ZNF568Q3ZCX4 644 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 SPECC1Q5M775 1068 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 KRT79Q5XKE5 535 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 SLC8B1Q6J4K2 584 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 ANKS3Q6ZW76 656 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 APBB1IPQ7Z5R6 666 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-208ENST00000478111 NPAS3Q8IXF0 933 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 ADSSL1Q8N142 457 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 ZBTB45Q96K62 511 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-208ENST00000478111 SNX27Q96L92 541 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 NTPCRQ9BSD7 190 aaKnown RBP18.32■□□□□ 0.52
TRIM13-208ENST00000478111 DDX23Q9BUQ8 820 aaKnown RBP18.32■□□□□ 0.52
TRIM13-208ENST00000478111 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
TRIM13-208ENST00000478111 RAB34Q9BZG1 259 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 KMT5AQ9NQR1 393 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-208ENST00000478111 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 PATJQ8NI35 1801 aa18.32■□□□□ 0.52
TRIM13-208ENST00000478111 CEP250Q9BV73 2442 aa18.31■□□□□ 0.52
TRIM13-208ENST00000478111 GPR179Q6PRD1 2367 aa18.31■□□□□ 0.52
TRIM13-208ENST00000478111 SFI1A8K8P3 1242 aa18.31■□□□□ 0.52
TRIM13-208ENST00000478111 LAD1O00515 517 aa18.31■□□□□ 0.52
TRIM13-208ENST00000478111 LRRN2O75325 713 aa18.31■□□□□ 0.52
TRIM13-208ENST00000478111 MCF2P10911 925 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms