RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 H0YGN5 161 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 H3BQF6 201 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 PDE2AO00408 941 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 PDXKO00764 312 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 MEIS2O14770 477 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 EPHB6O15197 1021 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CALUO43852 315 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ECE2O60344 883 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 MED24O75448 989 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TRPA1O75762 1119 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 MOCS3O95396 460 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TFRCP02786 760 aaKnown RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 PLEKP08567 350 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CYP3A4P08684 503 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 GAP43P17677 238 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ANXA13P27216 316 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 RPA1P27694 616 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CIITAP33076 1130 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 EPS15P42566 896 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 PAFAH1B1P43034 410 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 AARSP49588 968 aaKnown RBP eCLIP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 SPIRE1Q08AE8 756 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ADAM9Q13443 819 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 MRPL58Q14197 206 aaKnown RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ASIC2Q16515 512 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 BMT2Q1RMZ1 405 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ABCB5Q2M3G0 1257 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ASTE1Q2TB18 679 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TDRD12Q587J7 1177 aaKnown RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 DACT2Q5SW24 774 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 FAM83BQ5T0W9 1011 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 C10orf76Q5T2E6 689 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CCDC181Q5TID7 509 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 HGSNATQ68CP4 663 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CDPF1Q6NVV7 123 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 USP17L6PQ6QN14 398 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 KRT26Q7Z3Y9 468 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 FRMD5Q7Z6J6 570 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 KIAA0825Q8IV33 1275 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TTLL6Q8N841 843 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 SYT2Q8N9I0 419 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 GLIS3Q8NEA6 775 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 SUPT20HQ8NEM7 779 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ETNPPLQ8TBG4 499 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 SMCR8Q8TEV9 937 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 SCFD1Q8WVM8 642 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 EEF2KMTQ96G04 330 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CAPZA3Q96KX2 299 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 DRC1Q96MC2 740 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 NOX5Q96PH1 765 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CITED4Q96RK1 184 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 POLR3CQ9BUI4 534 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 DBNDD1Q9H9R9 158 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ELP3Q9H9T3 547 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 MLXIPQ9HAP2 919 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 METTL14Q9HCE5 456 aaKnown RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 RNF19AQ9NV58 838 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 KANSL3Q9P2N6 904 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 VTI1BQ9UEU0 232 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 PRKAG2Q9UGJ0 569 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 ZC3H7BQ9UGR2 993 aaKnown RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 RAPGEFL1Q9UHV5 662 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TFR2Q9UP52 801 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 DNM3Q9UQ16 869 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TRAF3IP3Q9Y228 551 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 CAPN6Q9Y6Q1 641 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 UBE4BO95155 1302 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TTC28Q96AY4 2481 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 GRID2IPA4D2P6 1211 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ERICH4A6NGS2 130 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 BTNL10A8MVZ5 291 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 F5H6K3 240 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 H0YIN7 160 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 SCAMP3O14828 347 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ZBTB39O15060 712 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NKRFO15226 690 aaKnown RBP eCLIP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 SLC16A3O15427 465 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 SRGAP2O75044 1071 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TBCAO75347 108 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NOL4O94818 638 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 CLSTN1O94985 981 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TIAF1O95411 115 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 EYA4O95677 639 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NDUFB10O96000 172 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 AFPP02771 609 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 MUTP22033 750 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NR2F2P24468 414 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 RPL13P26373 211 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TNFRSF8P28908 595 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF76P36508 570 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 STAT3P40763 770 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TNNT3P45378 269 aaPredicted RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 RBM5P52756 815 aaKnown RBP eCLIP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 POLR2FP61218 127 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 KLRC3Q07444 240 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 C2orf54Q08AI8 447 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms