RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 FBXO40Q9UH90 709 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 PCYOX1Q9UHG3 505 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 ZNFX1Q9P2E3 1918 aaKnown RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 MYPNQ86TC9 1320 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 GOLGA6L10A6NI86 522 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 SCP2P22307 547 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 RRM1P23921 792 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 CHRNA3P32297 505 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 SEC24CP53992 1094 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 DRG2P55039 364 aaKnown RBP11.27□□□□□ -0.61
MINDY3-206ENST00000477891 STRN3Q13033 797 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 C10orf67Q8IYJ2 551 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 PTPN22Q9Y2R2 807 aa11.27□□□□□ -0.61
MINDY3-206ENST00000477891 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
MINDY3-206ENST00000477891 CLDN3O15551 220 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ZC3H11AO75152 810 aaKnown RBP eCLIP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 SHBGP04278 402 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ICAM3P32942 547 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 MDH1P40925 334 aaKnown RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 RWDD2BP57060 319 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 BIRC3Q13489 604 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 VGLL4Q14135 290 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 OR5B17Q8NGF7 314 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 MORC4Q8TE76 937 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ANKFY1Q9P2R3 1169 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ANAPC7Q9UJX3 599 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 PCDHB2Q9Y5E7 798 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 MROH7Q68CQ1 1323 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 LCTP09848 1927 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 IGKV6D-21A0A0A0MT36 114 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 FARP2O94887 1054 aaPredicted RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ACO1P21399 889 aaKnown RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 MAPK4P31152 587 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 COILP38432 576 aaPredicted RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 CLUL1Q15846 466 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 CYP1B1Q16678 543 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 WDR44Q5JSH3 913 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 NOL9Q5SY16 702 aaKnown RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 LBX2Q6XYB7 198 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 ENOSF1Q7L5Y1 443 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 NLGN2Q8NFZ4 835 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 DEPTORQ8TB45 409 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 SLC7A3Q8WY07 619 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 HERPUD2Q9BSE4 406 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 NIFKQ9BYG3 293 aaKnown RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 KIAA1586Q9HCI6 787 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 RBAKQ9NYW8 714 aaPredicted RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 FEZ2Q9UHY8 353 aaPredicted RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 NOVA2Q9UNW9 492 aaKnown RBP11.26□□□□□ -0.61
MINDY3-206ENST00000477891 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 UMODL1Q5DID0 1318 aa11.26□□□□□ -0.61
MINDY3-206ENST00000477891 A0A0B4J269 797 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 SOWAHBA6NEL2 793 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 A6NNZ2 444 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 H0YCG3 227 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 O00370 1275 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 HSPA6P17066 643 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 TMOD1P28289 359 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 NAMPTP43490 491 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 ENPEPQ07075 957 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 TARBP2Q15633 366 aaKnown RBP11.25□□□□□ -0.61
MINDY3-206ENST00000477891 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 PASD1Q8IV76 773 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 CHST13Q8NET6 341 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 MSTO1Q9BUK6 570 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 SEMA4AQ9H3S1 761 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 SLC12A6Q9UHW9 1150 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 CNTNAP2Q9UHC6 1331 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 GGPS1O95749 300 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
MINDY3-206ENST00000477891 PIGRP01833 764 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 CYP1A1P04798 512 aaPredicted RBP11.25□□□□□ -0.61
MINDY3-206ENST00000477891 PMS2P54278 862 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 LY6KQ17RY6 165 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 KRT71Q3SY84 523 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 TMEM270Q6UE05 265 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 RUFY4Q6ZNE9 571 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 EPN3Q9H201 632 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 PABPC3Q9H361 631 aaKnown RBP11.25□□□□□ -0.61
MINDY3-206ENST00000477891 NUB1Q9Y5A7 615 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
MINDY3-206ENST00000477891 EBAG9O00559 213 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms