RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 S100A5P33763 92 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 ZNF132P52740 706 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 PTGDRQ13258 359 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 E2F2Q14209 437 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 MEA1Q16626 185 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 CCDC14Q49A88 953 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 CERKLQ49MI3 558 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 HSP90AA5PQ58FG0 334 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 ARL6IP4Q66PJ3 421 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 DDX42Q86XP3 938 aaKnown RBP eCLIP13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 GRAMD2AQ8IUY3 354 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 MDM1Q8TC05 714 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 PGM2Q96G03 612 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 PRPF18Q99633 342 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 NOX1Q9Y5S8 564 aa13.45□□□□□ -0.26
RTFDC1-207ENST00000477573 A0A088AWK7 358 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 UBTFL6P0CB48 400 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 COL6A2P12110 1019 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 GTF2H1P32780 548 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 CACNB3P54284 484 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 GIT2Q14161 759 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 SLC35G1Q2M3R5 365 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 SPDYAQ5MJ70 313 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 HS2ST1Q7LGA3 356 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 KRT25Q7Z3Z0 450 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 ZFPM1Q8IX07 1006 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 LSMEM2Q8N112 164 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 PIP4K2CQ8TBX8 421 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 KANSL2Q9H9L4 492 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 PNMA3Q9UL41 463 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 COL2A1P02458 1487 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 UMODL1Q5DID0 1318 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 ESYT2A0FGR8 921 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 M0R2N6 131 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 EYA4O95677 639 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 UBL4AP11441 157 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 GRIN1Q05586 938 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 MKRN3Q13064 507 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 KAZNQ674X7 775 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 VPS36Q86VN1 386 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 OR2W6PQ8NHA6 318 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 C2orf49Q9BVC5 232 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 VAT1LQ9HCJ6 419 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 TRIM33Q9UPN9 1127 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 TDRKHQ9Y2W6 561 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
RTFDC1-207ENST00000477573 KIF13BQ9NQT8 1826 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 ATRNL1Q5VV63 1379 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 ESYT3A0FGR9 886 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 SMCO2A6NFE2 343 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 DDTLA6NHG4 134 aaPredicted RBP13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 H0Y3Z8 333 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 LAD1O00515 517 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 HNRNPCL1O60812 293 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 DGKIO75912 1065 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 MCM7P33993 719 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 MXI1P50539 228 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 TNNC1P63316 161 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 PFKPQ01813 784 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 MAP3K10Q02779 954 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 WDR72Q3MJ13 1102 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 C6orf183Q5T699 404 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 METTL21CQ5VZV1 264 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 TATDN1Q6P1N9 297 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 NIM1KQ8IY84 436 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 SPATA20Q8TB22 786 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 NMD3Q96D46 503 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 PIGSQ96S52 555 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 TLE6Q9H808 572 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 AIPL1Q9NZN9 384 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 NYAP2Q9P242 653 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 HERC5Q9UII4 1024 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 PCDHAC2Q9Y5I4 1007 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
RTFDC1-207ENST00000477573 RASA4BC9J798 803 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 RASA4O43374 803 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ADCY3O60266 1144 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 APOEP02649 317 aa13.42□□□□□ -0.26
RTFDC1-207ENST00000477573 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms