RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CNNM3Q8NE01 707 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 ATRIPQ8WXE1 791 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 TCEAL4Q96EI5 215 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 SHDQ96IW2 340 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 JPH2Q9BR39 696 aaPredicted RBP10.85□□□□□ -0.67
COL4A5-204ENST00000477429 TTPALQ9BTX7 342 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 PARP2Q9UGN5 583 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 USP18Q9UMW8 372 aa10.85□□□□□ -0.67
COL4A5-204ENST00000477429 A0A1B0GUA9 196 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 HNRNPA1P09651 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 HSPA4P34932 840 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 OR1D2P34982 312 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 GRIK3Q13003 919 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 KRT32Q14532 448 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 EPHA7Q15375 998 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 ZBTB41Q5SVQ8 909 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 AXDND1Q5T1B0 1012 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 EEF1DP3Q658K8 133 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 BLOC1S2Q6QNY1 142 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 TMEM130Q8N3G9 435 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 FBXL16Q8N461 479 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 C3orf58Q8NDZ4 430 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 BSNDQ8WZ55 320 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 CCDC51Q96ER9 411 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 MTRQ99707 1265 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 OSBPL6Q9BZF3 934 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 SLKQ9H2G2 1235 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 SNTG2Q9NY99 539 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 DPP7Q9UHL4 492 aa10.84□□□□□ -0.67
COL4A5-204ENST00000477429 NDRG2Q9UN36 371 aaKnown RBP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 ZFP37Q9Y6Q3 630 aaPredicted RBP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 SF3B1O75533 1304 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A5-204ENST00000477429 PIEZO2Q9H5I5 2752 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 ASAP2O43150 1006 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 HRO43593 1189 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 HMGB1P09429 215 aaKnown RBP10.83□□□□□ -0.68
COL4A5-204ENST00000477429 AXLP30530 894 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 RPS9P46781 194 aaKnown RBP10.83□□□□□ -0.68
COL4A5-204ENST00000477429 SHC2P98077 582 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 STK3Q13188 491 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 TUSC3Q13454 348 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 RAB33AQ14088 237 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 PABPC1LQ4VXU2 614 aaKnown RBP10.83□□□□□ -0.68
COL4A5-204ENST00000477429 PRSS36Q5K4E3 855 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 LIN9Q5TKA1 542 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 SLC27A1Q6PCB7 646 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 MAEAQ7L5Y9 396 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 NOSTRINQ8IVI9 506 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 TPH2Q8IWU9 490 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 PIGOQ8TEQ8 1089 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 TCP11Q8WWU5 503 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 FAM20AQ96MK3 541 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 ZSWIM3Q96MP5 696 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 HSD17B14Q9BPX1 270 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 EIF2AK1Q9BQI3 630 aaKnown RBP10.83□□□□□ -0.68
COL4A5-204ENST00000477429 POLR3FQ9H1D9 316 aaPredicted RBP10.83□□□□□ -0.68
COL4A5-204ENST00000477429 PDZD7Q9H5P4 517 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 GOLGA2P5Q9HBQ8 144 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 POLD4Q9HCU8 107 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 LAMA5O15230 3695 aa10.83□□□□□ -0.68
COL4A5-204ENST00000477429 TEX15Q9BXT5 2789 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 SRRM3A6NNA2 597 aaPredicted RBP10.82□□□□□ -0.68
COL4A5-204ENST00000477429 CCNT1O60563 726 aaKnown RBP10.82□□□□□ -0.68
COL4A5-204ENST00000477429 MOSPD3O75425 235 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 ECI2O75521 394 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 KRT38O76015 456 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 RECQL4O94761 1208 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 SEC24AO95486 1093 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 RHOP08100 348 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 FGFR3P22607 806 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 TKTP29401 623 aaKnown RBP10.82□□□□□ -0.68
COL4A5-204ENST00000477429 HOXA9P31269 272 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 BRCC3P46736 316 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 SATB1Q01826 763 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 LMNB2Q03252 620 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 SSRP1Q08945 709 aaKnown RBP10.82□□□□□ -0.68
COL4A5-204ENST00000477429 FAM78AQ5JUQ0 283 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 GLRA4Q5JXX5 417 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 ELMSAN1Q6PJG2 1045 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 MTSS1LQ765P7 747 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 ADAM32Q8TC27 787 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 RSPRY1Q96DX4 576 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 TRIM6Q9C030 488 aaPredicted RBP10.82□□□□□ -0.68
COL4A5-204ENST00000477429 ZSWIM4Q9H7M6 989 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 RXFP3Q9NSD7 469 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 MTRRQ9UBK8 725 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
COL4A5-204ENST00000477429 CDY1Q9Y6F8 540 aa10.82□□□□□ -0.68
COL4A5-204ENST00000477429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.81□□□□□ -0.68
COL4A5-204ENST00000477429 PRR5-ARHGAP8B1AHC4 643 aa10.81□□□□□ -0.68
COL4A5-204ENST00000477429 TBX3O15119 743 aa10.81□□□□□ -0.68
COL4A5-204ENST00000477429 MEFVO15553 781 aaPredicted RBP10.81□□□□□ -0.68
COL4A5-204ENST00000477429 TBC1D4O60343 1298 aa10.81□□□□□ -0.68
COL4A5-204ENST00000477429 NR1I2O75469 434 aa10.81□□□□□ -0.68
COL4A5-204ENST00000477429 DEXIO95424 95 aa10.81□□□□□ -0.68
COL4A5-204ENST00000477429 GJA1P17302 382 aa10.81□□□□□ -0.68
COL4A5-204ENST00000477429 VIPR2P41587 438 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms