RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 IL18RAPO95256 599 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 PAPLNO95428 1278 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 BMP1P13497 986 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 LRPAP1P30533 357 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 NRIP1P48552 1158 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 GLUD2P49448 558 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 PPP2R3AQ06190 1150 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 ELMSAN1Q6PJG2 1045 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 RTL10Q7L3V2 364 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 CASP10Q92851 521 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 PAGE5Q96GU1 130 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 RHOBTB2Q9BYZ6 727 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 RPF1Q9H9Y2 349 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 AGO2Q9UKV8 859 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 PLXNA4Q9HCM2 1894 aa13.46□□□□□ -0.26
CLCNKA-205ENST00000477360 CUL9Q8IWT3 2517 aa13.46□□□□□ -0.26
CLCNKA-205ENST00000477360 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 HIDE1A8MVS5 230 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 B3GAT3O94766 335 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 KIF20AO95235 890 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 ADH1AP07327 375 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 KCNA5P22460 613 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 ADSSP30520 456 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 MATR3P43243 847 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 NDUFA8P51970 172 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 ENOX2Q16206 610 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 PLPP4Q5VZY2 271 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 ADGRD2Q7Z7M1 963 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 C12orf56Q8IXR9 622 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 SYCP3Q8IZU3 236 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 PIK3R5Q8WYR1 880 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 POMGNT1Q8WZA1 660 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 TIGD1Q96MW7 591 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 ZMAT2Q96NC0 199 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 OXCT2Q9BYC2 517 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 GDPD2Q9HCC8 539 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 SERTAD1Q9UHV2 236 aa13.45□□□□□ -0.26
CLCNKA-205ENST00000477360 NCOR1O75376 2440 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 SPTBN5Q9NRC6 3674 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 ARHGEF37A1IGU5 675 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 GRXCR2A6NFK2 248 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 ANKRD63C9JTQ0 380 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 SYN3O14994 580 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 ZNF202O95125 648 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 KIF4AO95239 1232 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 MYBP10242 640 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 NDUFV1P49821 464 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 CASP5P51878 434 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 OSTNP61366 133 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 CUL4BQ13620 913 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 KCNB1Q14721 858 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 SPATA1Q5VX52 437 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 KRBA2Q6ZNG9 492 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 SMRP1Q8NCR6 262 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 STAMQ92783 540 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 FBXL18Q96ME1 805 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 TTPALQ9BTX7 342 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 CLEC1BQ9P126 229 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 CD207Q9UJ71 328 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 PRUNE2Q8WUY3 3088 aa13.44□□□□□ -0.26
CLCNKA-205ENST00000477360 EYSQ5T1H1 3165 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 MEFVO15553 781 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 KLRC4O43908 158 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 EXTL3O43909 919 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 TBX10O75333 385 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 GLP2RO95838 553 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 CXCL8P10145 99 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 FGFR3P22607 806 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 AFMP43652 599 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 CLCNKBP51801 687 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 TFF2Q03403 129 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 ITIH3Q06033 890 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 MYBPC2Q14324 1141 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 SURF1Q15526 300 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 SMAD2Q15796 467 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 GLRA4Q5JXX5 417 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 HS2ST1Q7LGA3 356 aa13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 FMR1NBQ8N0W7 255 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-205ENST00000477360 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms