RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 DNAJC2Q99543 621 aaKnown RBP6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 RTFDC1Q9BY42 306 aaPredicted RBP6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 SNX14Q9Y5W7 946 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 COL24A1Q17RW2 1714 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 BRWD3Q6RI45 1802 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 SPEF2Q9C093 1822 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 FAM205AQ6ZU69 1335 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 UBR3Q6ZT12 1888 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 H0YIN7 160 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 RASGRP1O95267 797 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 HSPD1P10809 573 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 PCP11498 1178 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 ZNF20P17024 532 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 POLD1P28340 1107 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 DDIT3P35638 169 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 EVCP57679 992 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 TGFB2P61812 414 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 HERVK_113P62684 666 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 FKBP1AP62942 108 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 LACTBP83111 547 aaPredicted RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 PTH1RQ03431 593 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 CUL4AQ13619 759 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 ANKRD1Q15327 319 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 WDR72Q3MJ13 1102 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 C2orf27AQ580R0 203 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 TRIM61Q5EBN2 209 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 SLC9C2Q5TAH2 1124 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 CREB3L3Q68CJ9 461 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 HSCBQ8IWL3 235 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 GSTCDQ8NEC7 633 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 TBC1D22AQ8WUA7 517 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 DVL3Q92997 716 aaPredicted RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 EDC3Q96F86 508 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 ZSCAN31Q96LW9 406 aaPredicted RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 TTC14Q96N46 770 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 STRBPQ96SI9 672 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 MRPL4Q9BYD3 311 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 AGXT2Q9BYV1 514 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 COA1Q9GZY4 146 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 TMX4Q9H1E5 349 aaPredicted RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 OSBPL2Q9H1P3 480 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 SMURF1Q9HCE7 757 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 COQ6Q9Y2Z9 468 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 RBM8AQ9Y5S9 174 aaKnown RBP6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 SLC4A7Q9Y6M7 1214 aa6.82□□□□□ -1.32
CDKN1B-204ENST00000477087 WDR19Q8NEZ3 1342 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 ESYT3A0FGR9 886 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 SCDO00767 359 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 C4BPAP04003 597 aaKnown RBP6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 LDHCP07864 332 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 KCNJ4P48050 445 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 MMP14P50281 582 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 NEK4P51957 841 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 RUFY3Q7L099 469 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 ZNF804AQ7Z570 1209 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 ZNF589Q86UQ0 364 aaPredicted RBP6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 SLC7A14Q8TBB6 771 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 TBC1D16Q8TBP0 767 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 EYA3Q99504 573 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 C1QTNF3Q9BXJ4 246 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 CELF4Q9BZC1 486 aaKnown RBP6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 KATNBL1Q9H079 304 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 DEF6Q9H4E7 631 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 CD209Q9NNX6 404 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 PIH1D3Q9NQM4 214 aaKnown RBP6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 INCENPQ9NQS7 918 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 CYP46A1Q9Y6A2 500 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 PTCH2Q9Y6C5 1203 aa6.81□□□□□ -1.32
CDKN1B-204ENST00000477087 MAST3O60307 1309 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 GPR42O15529 346 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 GPAA1O43292 621 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 CNOT4O95628 575 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 FGAP02671 866 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 AOAHP28039 575 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 GYG1P46976 350 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 GSTO1P78417 241 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 GPSM2P81274 684 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 EXOSC10Q01780 885 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 ICAM4Q14773 271 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 CLEC17AQ6ZS10 378 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 BRAPQ7Z569 592 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 DDX60Q8IY21 1712 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 JMYQ8N9B5 988 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 SUPT20HQ8NEM7 779 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 NSUN4Q96CB9 384 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 NEK1Q96PY6 1258 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 CDK5RAP1Q96SZ6 601 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 SEC62Q99442 399 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 PTPN18Q99952 460 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 SEC61A2Q9H9S3 476 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 POLLQ9UGP5 575 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 ANAPC4Q9UJX5 808 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 FBXO10Q9UK96 956 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 LIMCH1Q9UPQ0 1083 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 TCAF1Q9Y4C2 921 aa6.8□□□□□ -1.32
CDKN1B-204ENST00000477087 LAMB2P55268 1798 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms