RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 GOLGA8IPA6NC78 632 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 GOLGA8JA6NMD2 632 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 C9IYK1 514 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 EXTL3O43909 919 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 ALADP13716 330 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 ATF7P17544 494 aaPredicted RBP19.19■□□□□ 0.66
SREBF1-211ENST00000476994 RPL13P26373 211 aaKnown RBP19.19■□□□□ 0.66
SREBF1-211ENST00000476994 TNFSF9P41273 254 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
SREBF1-211ENST00000476994 FILIP1Q7Z7B0 1213 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 CBWD2Q8IUF1 395 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 GPD1LQ8N335 351 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 ADAM2Q99965 735 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 MKNK1Q9BUB5 465 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 THAP9Q9H5L6 903 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 RC3H2Q9HBD1 1191 aaKnown RBP19.19■□□□□ 0.66
SREBF1-211ENST00000476994 RGS18Q9NS28 235 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 FANCLQ9NW38 375 aa19.19■□□□□ 0.66
SREBF1-211ENST00000476994 CPSF3Q9UKF6 684 aaKnown RBP19.19■□□□□ 0.66
SREBF1-211ENST00000476994 CETN3O15182 167 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 MAPK13O15264 365 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 GRM6O15303 877 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 SLC16A3O15427 465 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 GPR37L1O60883 481 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 ZNF623O75123 536 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 GRM5P41594 1212 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 MARSP56192 900 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 FAM189BP81408 668 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 TMEM132AQ24JP5 1023 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 SEZ6Q53EL9 994 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 TWF2Q6IBS0 349 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 MRPL10Q7Z7H8 261 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 ZNF598Q86UK7 904 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 PLEKHO2Q8TD55 490 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 ADPGKQ9BRR6 497 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 NXF3Q9H4D5 531 aaKnown RBP19.18■□□□□ 0.66
SREBF1-211ENST00000476994 FAM105AQ9NUU6 356 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 PRKAG3Q9UGI9 489 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 RAPGEFL1Q9UHV5 662 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 IPPQ9Y573 584 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 PCDHB7Q9Y5E2 793 aa19.18■□□□□ 0.66
SREBF1-211ENST00000476994 A0A0U1RQF3 1178 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 SMTNL1A8MU46 457 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 PI4K2BG5E9Z4 385 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 IBSPP21815 317 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-211ENST00000476994 ACOT2P49753 483 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 WNT7BP56706 349 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 SPOUT1Q5T280 376 aaKnown RBP19.17■□□□□ 0.66
SREBF1-211ENST00000476994 BRSK2Q8IWQ3 736 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 CRIPAKQ8N1N5 446 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 RNF214Q8ND24 703 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 NOC3LQ8WTT2 800 aaKnown RBP19.17■□□□□ 0.66
SREBF1-211ENST00000476994 MFSD14AQ96MC6 490 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 AAASQ9NRG9 546 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 HES2Q9Y543 173 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 PCDHB2Q9Y5E7 798 aa19.17■□□□□ 0.66
SREBF1-211ENST00000476994 EXOC3O60645 756 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 CSPG5O95196 566 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 LDHAP00338 332 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 ZSCAN20P17040 1043 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 PLA2G5P39877 138 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 MATR3P43243 847 aaKnown RBP eCLIP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 RAB27AP51159 221 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 POU5F1Q01860 360 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 ENOX2Q16206 610 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 SNRNP35Q16560 246 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 PAN2Q504Q3 1202 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 CEP135Q66GS9 1140 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 APTXQ7Z2E3 356 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 THNSL1Q8IYQ7 743 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 RNF39Q9H2S5 420 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 IGFLR1Q9H665 355 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 KIAA1586Q9HCI6 787 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 ALG13Q9NP73 1137 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 C1orf112Q9NSG2 853 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 PLAGL2Q9UPG8 496 aa19.16■□□□□ 0.66
SREBF1-211ENST00000476994 ARIH1Q9Y4X5 557 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 MRPL42Q9Y6G3 142 aaKnown RBP19.16■□□□□ 0.66
SREBF1-211ENST00000476994 MEIS3P2A8K0S8 358 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 CLTAP09496 248 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 ATP1A3P13637 1013 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 PSMC2P35998 433 aaKnown RBP19.15■□□□□ 0.66
SREBF1-211ENST00000476994 CYP24A1Q07973 514 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 COL19A1Q14993 1142 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 KYAT1Q16773 422 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 C1orf220Q5T0J3 134 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 SLC24A5Q71RS6 500 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 APBB1IPQ7Z5R6 666 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-211ENST00000476994 ECHDC2Q86YB7 292 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 TRIM59Q8IWR1 403 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 FAM186BQ8IYM0 893 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 CNOT6LQ96LI5 555 aaKnown RBP19.15■□□□□ 0.66
SREBF1-211ENST00000476994 CXCL16Q9H2A7 254 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 CD320Q9NPF0 282 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 RNF19AQ9NV58 838 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 SNTG2Q9NY99 539 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms