RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GPR88Q9GZN0 384 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 NHEJ1Q9H9Q4 299 aaPredicted RBP31.13■■■□□ 2.57
VEGFA-211ENST00000476772 TRMT1Q9NXH9 659 aaKnown RBP31.13■■■□□ 2.57
VEGFA-211ENST00000476772 SNTG2Q9NY99 539 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 ST3GAL5Q9UNP4 418 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 F8VZ95 297 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 PHACTR2O75167 634 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 PNMA6AP0CW24 399 aaPredicted RBP31.13■■■□□ 2.57
VEGFA-211ENST00000476772 ARID5AQ03989 594 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 HGSNATQ68CP4 663 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 FBXO46Q6PJ61 603 aaPredicted RBP31.13■■■□□ 2.57
VEGFA-211ENST00000476772 OSBPL7Q9BZF2 842 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 KCND1Q9NSA2 647 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 HES2Q9Y543 173 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 CITO14578 2027 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 NFICP08651 508 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 TMEM191BP0C7N4 346 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 FAM26DQ5JW98 314 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 JADE1Q6IE81 842 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 TRAPPC11Q7Z392 1133 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 PPM1KQ8N3J5 372 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 HELQQ8TDG4 1101 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 KAT5Q92993 513 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 NXF3Q9H4D5 531 aaKnown RBP31.12■■■□□ 2.57
VEGFA-211ENST00000476772 ASB7Q9H672 318 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 SPTLC3Q9NUV7 552 aa31.12■■■□□ 2.57
VEGFA-211ENST00000476772 ZC3H11AO75152 810 aaKnown RBP eCLIP31.11■■■□□ 2.57
VEGFA-211ENST00000476772 STAT1P42224 750 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 LBX1P52954 281 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 NFX1Q12986 1120 aaKnown RBP31.11■■■□□ 2.57
VEGFA-211ENST00000476772 FBXO47Q5MNV8 452 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 ZNF618Q5T7W0 954 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 SCARA3Q6AZY7 606 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 TATDN2Q93075 761 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 ANKRD36BP1Q96IX9 119 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 ZNF333Q96JL9 665 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 AGO3Q9H9G7 860 aaKnown RBP31.11■■■□□ 2.57
VEGFA-211ENST00000476772 EPN1Q9Y6I3 576 aaPredicted RBP31.11■■■□□ 2.57
VEGFA-211ENST00000476772 RALGAPA2Q2PPJ7 1873 aa31.11■■■□□ 2.57
VEGFA-211ENST00000476772 SERPING1P05155 500 aa31.1■■■□□ 2.57
VEGFA-211ENST00000476772 CDK7P50613 346 aa31.1■■■□□ 2.57
VEGFA-211ENST00000476772 NCOA4Q13772 614 aa31.1■■■□□ 2.57
VEGFA-211ENST00000476772 TDRD12Q587J7 1177 aaKnown RBP31.1■■■□□ 2.57
VEGFA-211ENST00000476772 PPP2R2CQ9Y2T4 447 aa31.1■■■□□ 2.57
VEGFA-211ENST00000476772 CAND2O75155 1236 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 NDUFA10O95299 355 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 TNNC2P02585 160 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 GHRP10912 638 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 SOX5P35711 763 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 EIF4A3P38919 411 aaKnown RBP31.09■■■□□ 2.57
VEGFA-211ENST00000476772 TWF2Q6IBS0 349 aaKnown RBP31.09■■■□□ 2.57
VEGFA-211ENST00000476772 IRF2BP2Q7Z5L9 587 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 CCDC170Q8IYT3 715 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 ACRBPQ8NEB7 543 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 KREMEN1Q96MU8 473 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 ADGRG1Q9Y653 693 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 GFPT2O94808 682 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 CKBP12277 381 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 WDR44Q5JSH3 913 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 CCDC42Q96M95 316 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 SEZ6LQ9BYH1 1024 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 C1orf112Q9NSG2 853 aa31.09■■■□□ 2.57
VEGFA-211ENST00000476772 GPR182O15218 404 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 CST3P01034 146 aaPredicted RBP31.08■■■□□ 2.57
VEGFA-211ENST00000476772 CYLC1P35663 651 aaPredicted RBP31.08■■■□□ 2.57
VEGFA-211ENST00000476772 KLHL30Q0D2K2 578 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 LPIN1Q14693 890 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 SPOPLQ6IQ16 392 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 PPP1R13BQ96KQ4 1090 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 SNX27Q96L92 541 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 APOL6Q9BWW8 343 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 ERVK-5Q9HDB9 667 aa31.08■■■□□ 2.57
VEGFA-211ENST00000476772 RECQL4O94761 1208 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 CD52P31358 61 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 YARSP54577 528 aaKnown RBP31.07■■■□□ 2.56
VEGFA-211ENST00000476772 MFAP3P55082 362 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 MAPK8IP2Q13387 824 aaPredicted RBP31.07■■■□□ 2.56
VEGFA-211ENST00000476772 CRISPLD2Q9H0B8 497 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 PLEKHA5Q9HAU0 1116 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 PADI3Q9ULW8 664 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 IPPQ9Y573 584 aa31.07■■■□□ 2.56
VEGFA-211ENST00000476772 SSU72P8A0A1W2PR75 194 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 FOXN3O00409 490 aaPredicted RBP31.06■■■□□ 2.56
VEGFA-211ENST00000476772 EVI5O60447 810 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 CCDC175P0C221 793 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 FERP16591 822 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 TMEM132DQ14C87 1099 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 CD302Q8IX05 232 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 FAM126BQ8IXS8 530 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 U2AF1L4Q8WU68 220 aaKnown RBP31.06■■■□□ 2.56
VEGFA-211ENST00000476772 CXCL16Q9H2A7 254 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 DEF6Q9H4E7 631 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 HAUS4Q9H6D7 363 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 APOBEC3GQ9HC16 384 aaKnown RBP31.06■■■□□ 2.56
VEGFA-211ENST00000476772 ZSCAN12O43309 604 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 AKAP5P24588 427 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 PRKCIP41743 596 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 NOP14P78316 857 aaKnown RBP31.06■■■□□ 2.56
VEGFA-211ENST00000476772 PAK2Q13177 524 aa31.06■■■□□ 2.56
VEGFA-211ENST00000476772 TRAF7Q6Q0C0 670 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms