RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ARPP19P56211 112 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 CREMQ03060 361 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 MTAPQ13126 283 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 PRPF4BQ13523 1007 aaKnown RBP13.22□□□□□ -0.29
HDAC6-219ENST00000476625 RAB33AQ14088 237 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 PCBP1Q15365 356 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC6-219ENST00000476625 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 HS6ST3Q8IZP7 471 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 SHDQ96IW2 340 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 ZSWIM3Q96MP5 696 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 MTMR9Q96QG7 549 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 PRMT7Q9NVM4 692 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-219ENST00000476625 MTRRQ9UBK8 725 aa13.22□□□□□ -0.29
HDAC6-219ENST00000476625 MRPS23Q9Y3D9 190 aaKnown RBP13.22□□□□□ -0.29
HDAC6-219ENST00000476625 WDR27A2RRH5 827 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 N4BP3O15049 544 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-219ENST00000476625 NEMFO60524 1076 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 LILRB5O75023 590 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 XYLBO75191 536 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 SEC24AO95486 1093 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 OSTNP61366 133 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 ROR1Q01973 937 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 PRKCQQ04759 706 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 DMWDQ09019 674 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 SRSF5Q13243 272 aaKnown RBP13.21□□□□□ -0.29
HDAC6-219ENST00000476625 ECM1Q16610 540 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-219ENST00000476625 GPIHBP1Q8IV16 184 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 GPR65Q8IYL9 337 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 PPP1R10Q96QC0 940 aaKnown RBP13.21□□□□□ -0.29
HDAC6-219ENST00000476625 TM6SF1Q9BZW5 370 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 USP18Q9UMW8 372 aa13.21□□□□□ -0.29
HDAC6-219ENST00000476625 ZFP37Q9Y6Q3 630 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-219ENST00000476625 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 CITO14578 2027 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 B3GAT3O94766 335 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 C1RP00736 705 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 TDGF1P13385 188 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 HOXA9P31269 272 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 SPEM2Q0P670 501 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 FAM187BQ17R55 369 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 ZNF528Q3MIS6 628 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 FAM78AQ5JUQ0 283 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 PRSS36Q5K4E3 855 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
HDAC6-219ENST00000476625 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 ATRIPQ8WXE1 791 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 NELL1Q92832 810 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 CLDN23Q96B33 292 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 CORO1BQ9BR76 489 aa13.2□□□□□ -0.3
HDAC6-219ENST00000476625 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-219ENST00000476625 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.2□□□□□ -0.3
HDAC6-219ENST00000476625 SPTLC1O15269 473 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 CDKL5O76039 1030 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 MCM7P33993 719 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 VIPR2P41587 438 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 ME3Q16798 604 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 UPP1Q16831 310 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 VITQ6UXI7 678 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-219ENST00000476625 C18orf25Q96B23 403 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-219ENST00000476625 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
HDAC6-219ENST00000476625 NAP1L4Q99733 375 aaKnown RBP13.19□□□□□ -0.3
HDAC6-219ENST00000476625 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 C2orf42Q9NWW7 574 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 PCDHGA2Q9Y5H1 932 aa13.19□□□□□ -0.3
HDAC6-219ENST00000476625 GPR179Q6PRD1 2367 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 TSC2P49815 1807 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 MOSPD3O75425 235 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 ECI2O75521 394 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 XBP1P17861 261 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 CDR1P51861 262 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 SATB1Q01826 763 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 GAS6Q14393 721 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 NBR1Q14596 966 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 MAPK6Q16659 721 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
HDAC6-219ENST00000476625 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 DEPTORQ8TB45 409 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 RSPRY1Q96DX4 576 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 RALGAPA1Q6GYQ0 2036 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 CEP250Q9BV73 2442 aa13.18□□□□□ -0.3
HDAC6-219ENST00000476625 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-219ENST00000476625 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
HDAC6-219ENST00000476625 TMEM189-UBE2V1I3L0A0 370 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms