RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 USHBP1Q8N6Y0 703 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 UBR7Q8N806 425 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ANKRD42Q8N9B4 389 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 FLCNQ8NFG4 579 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 LILRB4Q8NHJ6 448 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CEP70Q8NHQ1 597 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CAGE1Q8TC20 777 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PXYLP1Q8TE99 480 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 GIPC3Q8TF64 312 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 SSH1Q8WYL5 1049 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ARHGEF2Q92974 986 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 TBC1D20Q96BZ9 403 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 TIFAQ96CG3 184 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 NMD3Q96D46 503 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 RMDN1Q96DB5 314 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 DNAJC1Q96KC8 554 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 FBXL18Q96ME1 805 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CCDC43Q96MW1 224 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 NUDCD1Q96RS6 583 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PLEKHF1Q96S99 279 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 LPIN3Q9BQK8 851 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 NEURL2Q9BR09 285 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 RIOK1Q9BRS2 568 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 MXD3Q9BW11 206 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PLVAPQ9BX97 442 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CALN1Q9BXU9 219 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 API5Q9BZZ5 524 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 MTMR12Q9C0I1 747 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 ASCC2Q9H1I8 757 aaPredicted RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 EHD1Q9H4M9 534 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 DCLRE1BQ9H816 532 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 FANCEQ9HB96 536 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PLGRKTQ9HBL7 147 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 PALMDQ9NP74 551 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 SEPT11Q9NVA2 429 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 DDX43Q9NXZ2 648 aaKnown RBP4.4□□□□□ -1.7
CD55-208ENST00000476590 SAR1BQ9Y6B6 198 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 SLC4A4Q9Y6R1 1079 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 OVOS2A0A0G2JMS6 1433 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 OVOS2A0A0J9YW53 1432 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 OVOS2Q6IE36 1432 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CASKIN1Q8WXD9 1431 aa4.4□□□□□ -1.7
CD55-208ENST00000476590 CASZ1Q86V15 1759 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ACEP12821 1306 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 PASKQ96RG2 1323 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 DNMBPQ6XZF7 1577 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 MYH15Q9Y2K3 1946 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 SBNO1A3KN83 1393 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 LRRC72A6NJI9 287 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 OR5K4A6NMS3 321 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 FADS2P1A8MWK0 482 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 PRRT4C9JH25 899 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 PIK3R2O00459 728 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ZBTB7BO15156 539 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 NCK2O43639 380 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ECE2O60344 883 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 A1BGP04217 495 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 CALM1P0DP23 149 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 CALM2P0DP24 149 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 CALM3P0DP25 149 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 POLR2CP19387 275 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 GTF2H1P32780 548 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 NR2C2P49116 596 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ST13P50502 369 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 STAT2P52630 851 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 RPS3AP61247 264 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 PRKCEQ02156 737 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 RUNX1T1Q06455 604 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 TRAP1Q12931 704 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 LPIN1Q14693 890 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 NR6A1Q15406 480 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ZC2HC1CQ53FD0 456 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 HSP90AA5PQ58FG0 334 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 AKAP4Q5JQC9 854 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 NKAPLQ5M9Q1 402 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 AGBL2Q5U5Z8 902 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 METTL11BQ5VVY1 283 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 RUFY3Q7L099 469 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 SFR1Q86XK3 245 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 VPS37DQ86XT2 251 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 MMAAQ8IVH4 418 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 IFT20Q8IY31 132 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ELMOD1Q8N336 334 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 ENAHQ8N8S7 591 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 PDZD8Q8NEN9 1154 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 BCL7CQ8WUZ0 217 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 TMA16Q96EY4 203 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 LTV1Q96GA3 475 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 PBKQ96KB5 322 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 AIFM3Q96NN9 605 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 SAMD11Q96NU1 681 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 GPATCH1Q9BRR8 931 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 SPZ1Q9BXG8 430 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 SMARCAD1Q9H4L7 1026 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 SLC38A10Q9HBR0 1119 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 NEK6Q9HC98 313 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 POLD4Q9HCU8 107 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 FANCFQ9NPI8 374 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms