RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 FOXRED1Q96CU9 486 aaPredicted RBP6.86□□□□□ -1.31
NUP58-209ENST00000476553 CDK5RAP3Q96JB5 506 aa6.86□□□□□ -1.31
NUP58-209ENST00000476553 TBATAQ96M53 351 aa6.86□□□□□ -1.31
NUP58-209ENST00000476553 ZNF512Q96ME7 567 aaPredicted RBP6.86□□□□□ -1.31
NUP58-209ENST00000476553 MYD88Q99836 296 aa6.86□□□□□ -1.31
NUP58-209ENST00000476553 LRRC27Q9C0I9 530 aa6.86□□□□□ -1.31
NUP58-209ENST00000476553 MTFR1LQ9H019 292 aa6.86□□□□□ -1.31
NUP58-209ENST00000476553 SAGE1Q9NXZ1 904 aa6.86□□□□□ -1.31
NUP58-209ENST00000476553 DDX20Q9UHI6 824 aaKnown RBP6.86□□□□□ -1.31
NUP58-209ENST00000476553 APOBEC2Q9Y235 224 aaKnown RBP6.86□□□□□ -1.31
NUP58-209ENST00000476553 hCG_1984214I3L0E3 225 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 NEMP1O14524 444 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 TRIM24O15164 1050 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 SNX2O60749 519 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 DNM2P50570 870 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 TIGD2Q4W5G0 525 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 TMEM240Q5SV17 173 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 CPA6Q8N4T0 437 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 FUBP3Q96I24 572 aaKnown RBP eCLIP6.85□□□□□ -1.31
NUP58-209ENST00000476553 C16orf92Q96LL3 132 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 AIFM3Q96NN9 605 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.85□□□□□ -1.316e-11■□□□□ 9.5
NUP58-209ENST00000476553 ALDH8A1Q9H2A2 487 aaPredicted RBP6.85□□□□□ -1.31
NUP58-209ENST00000476553 TRIM39Q9HCM9 518 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 ANLNQ9NQW6 1124 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 KCNG1Q9UIX4 513 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 SORCS3Q9UPU3 1222 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 SLC45A1Q9Y2W3 748 aa6.85□□□□□ -1.31
NUP58-209ENST00000476553 CENPVL1A0A0U1RR11 272 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 K7ESF4 209 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 TOX4O94842 621 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 AGR2O95994 175 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 RECQLP46063 649 aaPredicted RBP6.84□□□□□ -1.31
NUP58-209ENST00000476553 SUMO1P63165 101 aaKnown RBP6.84□□□□□ -1.31
NUP58-209ENST00000476553 FAM133BQ5BKY9 247 aaKnown RBP6.84□□□□□ -1.31
NUP58-209ENST00000476553 CBARPQ8N350 705 aaPredicted RBP6.84□□□□□ -1.31
NUP58-209ENST00000476553 ACRBPQ8NEB7 543 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 IL17REQ8NFR9 667 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 CPT1CQ8TCG5 803 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 POF1BQ8WVV4 589 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 SAP30BPQ9UHR5 308 aaKnown RBP6.84□□□□□ -1.31
NUP58-209ENST00000476553 MAGEL2Q9UJ55 1249 aa6.84□□□□□ -1.31
NUP58-209ENST00000476553 TNPO3Q9Y5L0 923 aaKnown RBP6.84□□□□□ -1.31
NUP58-209ENST00000476553 A0A1W2PRQ8 180 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 GOLGA8BA8MQT2 603 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 KPNA6O60684 536 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 PRKD3O94806 890 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 ASLP04424 464 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 MYBL2P10244 700 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 ID4P47928 161 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 ANTXR2P58335 489 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 CDC37Q16543 378 aaPredicted RBP6.83□□□□□ -1.32
NUP58-209ENST00000476553 MZT2BQ6NZ67 158 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 RSRC2Q7L4I2 434 aaKnown RBP6.83□□□□□ -1.32
NUP58-209ENST00000476553 SKAP1Q86WV1 359 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 MYLK4Q86YV6 388 aaPredicted RBP6.83□□□□□ -1.32
NUP58-209ENST00000476553 OR2W6PQ8NHA6 318 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 ST8SIA2Q92186 375 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 NAA15Q9BXJ9 866 aaKnown RBP6.83□□□□□ -1.32
NUP58-209ENST00000476553 CYP4F11Q9HBI6 524 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 PCDHGB3Q9Y5G1 929 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 PCDHA9Q9Y5H5 950 aa6.83□□□□□ -1.32
NUP58-209ENST00000476553 OPA1O60313 960 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 RPN1P04843 607 aaKnown RBP6.82□□□□□ -1.32
NUP58-209ENST00000476553 JUNP05412 331 aaKnown RBP6.82□□□□□ -1.32
NUP58-209ENST00000476553 SLC5A1P13866 664 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 ALDH5A1P51649 535 aaPredicted RBP6.82□□□□□ -1.32
NUP58-209ENST00000476553 NUCB1Q02818 461 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 SPIDRQ14159 915 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 INAVAQ3KP66 663 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 EPHA10Q5JZY3 1008 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.82□□□□□ -1.32
NUP58-209ENST00000476553 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
NUP58-209ENST00000476553 PLA2G15Q8NCC3 412 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 MYEOVQ96EZ4 313 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 LRGUKQ96M69 825 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 C1orf112Q9NSG2 853 aa6.82□□□□□ -1.32
NUP58-209ENST00000476553 TRMT13Q9NUP7 481 aaKnown RBP6.82□□□□□ -1.32
NUP58-209ENST00000476553 J3KRW8 73 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 FZD9O00144 591 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 DHX16O60231 1041 aaKnown RBP6.81□□□□□ -1.32
NUP58-209ENST00000476553 CRTAMO95727 393 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 ZKSCAN1P17029 563 aaPredicted RBP6.81□□□□□ -1.32
NUP58-209ENST00000476553 LAG3P18627 525 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 VCAM1P19320 739 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 FLT3P36888 993 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 RXRGP48443 463 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 GABREP78334 506 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 ZNF460Q14592 562 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 PDCD2Q16342 344 aaPredicted RBP6.81□□□□□ -1.32
NUP58-209ENST00000476553 DGKDQ16760 1214 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 ZNF362Q5T0B9 420 aaPredicted RBP6.81□□□□□ -1.32
NUP58-209ENST00000476553 TSHZ3Q63HK5 1081 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 IQSEC1Q6DN90 963 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 LDHAL6AQ6ZMR3 332 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 CHST15Q7LFX5 561 aaPredicted RBP6.81□□□□□ -1.32
NUP58-209ENST00000476553 BRAPQ7Z569 592 aa6.81□□□□□ -1.32
NUP58-209ENST00000476553 FAM43AQ8N2R8 423 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms