RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 PPEF1O14829 653 aaPredicted RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 SPDYCQ5MJ68 293 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 IFNLR1Q8IU57 520 aaPredicted RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 FAM13CQ8NE31 585 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 FAM20AQ96MK3 541 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 NUDCD1Q96RS6 583 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 POP1Q99575 1024 aaKnown RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 SPOCK3Q9BQ16 436 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 INTS2Q9H0H0 1204 aaKnown RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 CARD9Q9H257 536 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 RNPEPL1Q9HAU8 725 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 BMP2KQ9NSY1 1161 aaPredicted RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 RABL2BQ9UNT1 228 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 LRRC42Q9Y546 428 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 GRIN3BO60391 1043 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 LUC7L3O95232 432 aaKnown RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 GDF11O95390 407 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CBX6O95503 412 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CYP1A1P04798 512 aaPredicted RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 CRKP46108 304 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 PMS2P54278 862 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 EXOC3L1Q86VI1 746 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CCDC25Q86WR0 208 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 JAMLQ86YT9 394 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 KIAA0825Q8IV33 1275 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 FAM186BQ8IYM0 893 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 KIFAP3Q92845 792 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CENPTQ96BT3 561 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 IDI2Q9BXS1 227 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 KLHL42Q9P2K6 505 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 RABGAP1Q9Y3P9 1069 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 COL4A5P29400 1685 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 C6orf229H3BNL8 230 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 ATP6V1C1P21283 382 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 ABCB4P21439 1286 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 SERPINB4P48594 390 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 INHBCP55103 352 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 TCP10Q12799 353 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 MTMR3Q13615 1198 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CUL3Q13618 768 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 EPC2Q52LR7 807 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 SLF2Q8IX21 1173 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 NAP1L4Q99733 375 aaKnown RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 MYLK2Q9H1R3 596 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 ALG6Q9Y672 507 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 ATRNL1Q5VV63 1379 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 TMEM120BA0PK00 339 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 NPTXRO95502 500 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 APBA3O96018 575 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 UBTFL6P0CB48 400 aaPredicted RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 ZCCHC18P0CG32 403 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CALB2P22676 271 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 DRG2P55039 364 aaKnown RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 KLC1Q07866 573 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 RCN2Q14257 317 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 SLMAPQ14BN4 828 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 CYP1B1Q16678 543 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 DENND2CQ68D51 928 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 NRG4Q8WWG1 115 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 IFT43Q96FT9 208 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 ADAM33Q9BZ11 813 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 PABPC3Q9H361 631 aaKnown RBP8.94□□□□□ -0.98
VAPB-205ENST00000476395 UNC45AQ9H3U1 944 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 NMRK1Q9NWW6 199 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 PCYOX1Q9UHG3 505 aa8.94□□□□□ -0.98
VAPB-205ENST00000476395 SIP14410 1827 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DOCK5Q9H7D0 1870 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 RBM47A0AV96 593 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 ZSCAN9O15535 394 aaPredicted RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 ARP10275 920 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PYGMP11217 842 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 IVDP26440 423 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 CCNFP41002 786 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 STAT1P42224 750 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 ECE1P42892 770 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 CCNG1P51959 295 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DR1Q01658 176 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 SYDE2Q5VT97 1194 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 RFX8Q6ZV50 586 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PRUNE1Q86TP1 453 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 NEK9Q8TD19 979 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DTX3LQ8TDB6 740 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PSPC1Q8WXF1 523 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 ERP27Q96DN0 273 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PGM2Q96G03 612 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 BTBD6Q96KE9 485 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 AMNQ9BXJ7 453 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 DENND2DQ9H6A0 471 aaPredicted RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 CCDC134Q9H6E4 229 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 KCNK9Q9NPC2 374 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 LUC7LQ9NQ29 371 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 RHBDL2Q9NX52 303 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 USP20Q9Y2K6 914 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 UTP11Q9Y3A2 253 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 NUMBLQ9Y6R0 609 aa8.93□□□□□ -0.98
VAPB-205ENST00000476395 PSMC2P35998 433 aaKnown RBP8.93□□□□□ -0.98
VAPB-205ENST00000476395 AUHQ13825 339 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms