RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 NOGQ13253 232 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 EIF4HQ15056 248 aaKnown RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 UBE3CQ15386 1083 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 TAF5Q15542 800 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 INTS11Q5TA45 600 aaKnown RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 HIBCHQ6NVY1 386 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 MZT2BQ6NZ67 158 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 ABHD15Q6UXT9 468 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 CYP26C1Q6V0L0 522 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 PRR23BQ6ZRT6 265 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 RSPH3Q86UC2 560 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 UNC5BQ8IZJ1 945 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 LINC00482Q8N8I6 264 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 ATG16L2Q8NAA4 619 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 C3orf20Q8ND61 904 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 GIMAP8Q8ND71 665 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 PIK3C3Q8NEB9 887 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 ZNF480Q8WV37 535 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 SNX33Q8WV41 574 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 TRAPPC12Q8WVT3 735 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 HOXB13Q92826 284 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 NKD2Q969F2 451 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 RAB24Q969Q5 203 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 MTFMTQ96DP5 389 aaKnown RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 CLPTM1LQ96KA5 538 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 UIMC1Q96RL1 719 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 SGPP1Q9BX95 441 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 C22orf23Q9BZE7 217 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 MCOLN1Q9GZU1 580 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 C14orf93Q9H972 538 aaKnown RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 ITM2CQ9NQX7 267 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 VPS45Q9NRW7 570 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 IFT80Q9P2H3 777 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-207ENST00000476169 GRHPRQ9UBQ7 328 aa4.91□□□□□ -1.62
VPS13D-207ENST00000476169 A0A1B0GVC2 190 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 A0A1W2PPL8 197 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 H3BUI4 141 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 FOXN3O00409 490 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 PHGDHO43175 533 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 IRAK2O43187 625 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 SEMA7AO75326 666 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 HMGCRP04035 888 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 HARSP12081 509 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 RPL17P18621 184 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 MCCP23508 829 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 POLD1P28340 1107 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 SLC7A1P30825 629 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 KRT9P35527 623 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 HK3P52790 923 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 MLLT6P55198 1093 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 SESN2P58004 480 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 FGL2Q14314 439 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 MST1LQ2TV78 715 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 C19orf54Q5BKX5 351 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 VPS53Q5VIR6 699 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 TTLL5Q6EMB2 1281 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 RETSATQ6NUM9 610 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 C1orf122Q6ZSJ8 110 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 TAS1R1Q7RTX1 841 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 RTKN2Q8IZC4 609 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 TXLNBQ8N3L3 684 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 SNRNP27Q8WVK2 155 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 ZCCHC14Q8WYQ9 949 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 HDAC2Q92769 488 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 USP13Q92995 863 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 MUL1Q969V5 352 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 ZNF566Q969W8 418 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 TTLL2Q9BWV7 592 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.9□□□□□ -1.635e-14■■■□□ 17.9
VPS13D-207ENST00000476169 UNC45AQ9H3U1 944 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 ZMAT3Q9HA38 289 aaKnown RBP4.9□□□□□ -1.63
VPS13D-207ENST00000476169 KCNK12Q9HB15 430 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 ZFP64Q9NPA5 681 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 LMBRD1Q9NUN5 540 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 PDP2Q9P2J9 529 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 PMF1-BGLAPU3KQ54 211 aa4.9□□□□□ -1.63
VPS13D-207ENST00000476169 A0A088AWK7 358 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 A6NCN8 305 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 IL18RAPO95256 599 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 ARIH2O95376 493 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 CD4P01730 458 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 KITP10721 976 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 TSHRP16473 764 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 SYN1P17600 705 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 ITGB5P18084 799 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 CNTFP26441 200 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 IL13P35225 146 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 ETV4P43268 484 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 SLC6A9P48067 706 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 HSPA7P48741 367 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 ALDH9A1P49189 494 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 MEOX1P50221 254 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 TERF1P54274 439 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 MPP1Q00013 466 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 TARDBPQ13148 414 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS13D-207ENST00000476169 TOP3AQ13472 1001 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-207ENST00000476169 DAG1Q14118 895 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 POSTNQ15063 836 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms