RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, human

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF1-205	ENST00000475993	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	NUMBL	Q9Y6R0	609 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	KAT6B	Q8WYB5	2073 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	POTEM	A6NI47	508 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	TSPY2	A6NKD2	308 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	NR2F2	P24468	414 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	SIX1	Q15475	284 aa	Predicted RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	ECM1	Q16610	540 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	PDK4	Q16654	411 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	KYNU	Q16719	465 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	TMEM266	Q2M3C6	531 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	NLRP9	Q7RTR0	991 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	TTC30A	Q86WT1	665 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	UBL4B	Q8N7F7	174 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	C12orf50	Q8NA57	414 aa	Predicted RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	DTX3L	Q8TDB6	740 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	NAT14	Q8WUY8	206 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	PPP2R3C	Q969Q6	453 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	PTCD3	Q96EY7	689 aa	Known RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	ZSWIM1	Q9BR11	485 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	EXOC3	O60645	756 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	ZWINT	O95229	277 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	MARCKSL1	P49006	195 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	ADAR	P55265	1226 aa	Known RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	PUS10	Q3MIT2	529 aa	Known RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	CFAP157	Q5JU67	520 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	KRT79	Q5XKE5	535 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	C11orf63	Q6NUN7	778 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	GJB7	Q6PEY0	223 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	SLC2A7	Q6PXP3	512 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	DGKH	Q86XP1	1220 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	SLCO2A1	Q92959	643 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	STMN2	Q93045	179 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	THAP2	Q9H0W7	228 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	EMILIN3	Q9NT22	766 aa		11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	TDRKH	Q9Y2W6	561 aa	Known RBP	11.22	□□□□□ -0.61
ABCF1-205	ENST00000475993	TNS2	Q63HR2	1409 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	C10orf71	Q711Q0	1435 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	TCRBV7S2A1N4T	A0A589	114 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	RASA4B	C9J798	803 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	RASA4	O43374	803 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	IDO1	P14902	403 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	CHRNB2	P17787	502 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	SMARCA1	P28370	1054 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	STAT1	P42224	750 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	KCNJ1	P48048	391 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	CD97	P48960	835 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	SLC18A1	P54219	525 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	IGBP1	P78318	339 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	MTDH	Q86UE4	582 aa	Known RBP	11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	WDR75	Q8IWA0	830 aa	Known RBP	11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	ZNF398	Q8TD17	642 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	MAML1	Q92585	1016 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	RAB34	Q9BZG1	259 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	NINJ2	Q9NZG7	142 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	GRID1	Q9ULK0	1009 aa		11.21	□□□□□ -0.61
ABCF1-205	ENST00000475993	LAMB1	P07942	1786 aa		11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	PRPF4	O43172	522 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	RAD21	O60216	631 aa		11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	XRCC5	P13010	732 aa	Known RBP	11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	ITIH2	P19823	946 aa		11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	NAPA	P54920	295 aa		11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	FOXD4	Q12950	439 aa	Predicted RBP	11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	SPARCL1	Q14515	664 aa		11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	PDCD7	Q8N8D1	485 aa	Known RBP	11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	POP1	Q99575	1024 aa	Known RBP	11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	WASF2	Q9Y6W5	498 aa		11.21	□□□□□ -0.62
ABCF1-205	ENST00000475993	ANKRD62	A6NC57	917 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SMCO2	A6NFE2	343 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993		A8MXQ7	604 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	ERVV-2	B6SEH9	535 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	THAP12	O43422	761 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	VAV1	P15498	845 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	GNA11	P29992	359 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SOX5	P35711	763 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	GALK1	P51570	392 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	HPCA	P84074	193 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SULT2A1	Q06520	285 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	MAP7	Q14244	749 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SEL1L2	Q5TEA6	688 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	FAAH2	Q6GMR7	532 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	PACS1	Q6VY07	963 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SPATA24	Q86W54	205 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	RHOT2	Q8IXI1	618 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	PPP1R14B	Q96C90	147 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SNX27	Q96L92	541 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	ZMAT2	Q96NC0	199 aa	Known RBP	11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	TUBB6	Q9BUF5	446 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	LRRC19	Q9H756	370 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	C6orf50	Q9HD87	102 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	UBN1	Q9NPG3	1134 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	IL17RB	Q9NRM6	502 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	TUBA8	Q9NY65	449 aa	Predicted RBP	11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	MTUS1	Q9ULD2	1270 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	TRAF3IP3	Q9Y228	551 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	NHSL1	Q5SYE7	1610 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SPTLC1	O15269	473 aa		11.2	□□□□□ -0.62
ABCF1-205	ENST00000475993	SLC37A4	O43826	429 aa		11.2	□□□□□ -0.62

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