RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CCL23P55773 120 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 CLDN10P78369 228 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 MTF1Q14872 753 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 TMEM139Q8IV31 216 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 ZMAT2Q96NC0 199 aaKnown RBP19.55■□□□□ 0.72
ATG4B-217ENST00000475693 CHP1Q99653 195 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 CGRRF1Q99675 332 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 ERVK-5Q9HDB9 667 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 ABHD10Q9NUJ1 306 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 IPPQ9Y573 584 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 FAM170AA1A519 330 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 LRRC53A6NM62 1247 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 COL6A1P12109 1028 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 SKILP12757 684 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 GSDMDP57764 484 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 MCCD1P59942 119 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-217ENST00000475693 ARID5AQ03989 594 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 FAAP100Q0VG06 881 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 PAK2Q13177 524 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 RAPGEF1Q13905 1077 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 IQCEQ6IPM2 695 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 C15orf39Q6ZRI6 1047 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 PARP2Q9UGN5 583 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 MROH7Q68CQ1 1323 aa19.54■□□□□ 0.72
ATG4B-217ENST00000475693 RECQL4O94761 1208 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 ARHGAP44Q17R89 818 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 FAM26DQ5JW98 314 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 WDR59Q6PJI9 974 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 CACNA2D4Q7Z3S7 1137 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 KCND1Q9NSA2 647 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 NBNO60934 754 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 CLSTN1O94985 981 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 HLA-DRAP01903 254 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 PLEKP08567 350 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-217ENST00000475693 EN2P19622 333 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-217ENST00000475693 GRM5P41594 1212 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 LRRC26Q2I0M4 334 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 ZACNQ401N2 412 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 RNF169Q8NCN4 708 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 RAB20Q9NX57 234 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 ANK1P16157 1881 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 TET1Q8NFU7 2136 aa19.53■□□□□ 0.72
ATG4B-217ENST00000475693 GTPBP10A4D1E9 387 aaKnown RBP19.52■□□□□ 0.72
ATG4B-217ENST00000475693 SOWAHDA6NJG2 315 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 CYP2C18P33260 490 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 TCTN1Q2MV58 587 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 DCAF4L1Q3SXM0 396 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 LRRC8DQ7L1W4 858 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 TRAPPC11Q7Z392 1133 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 RTN4RL1Q86UN2 441 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-217ENST00000475693 CCDC150Q8NCX0 1101 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 FBXL13Q8NEE6 735 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 ZFP42Q96MM3 310 aa19.52■□□□□ 0.72
ATG4B-217ENST00000475693 UBE2TQ9NPD8 197 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-217ENST00000475693 GPR182O15218 404 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 TNNT1P13805 278 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 AXLP30530 894 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 C18orf25Q96B23 403 aaPredicted RBP19.52■□□□□ 0.71
ATG4B-217ENST00000475693 ARID3AQ99856 593 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 ADAM2Q99965 735 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 NUP58Q9BVL2 599 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 CACNG4Q9UBN1 327 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 DNAJC12Q9UKB3 198 aa19.52■□□□□ 0.71
ATG4B-217ENST00000475693 PHACTR2O75167 634 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 TPM1P09493 284 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 ZBED6P86452 979 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 OR8K1Q8NGG5 319 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 BAG1Q99933 345 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-217ENST00000475693 TMEM106CQ9BVX2 250 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 APOBEC3GQ9HC16 384 aaKnown RBP19.51■□□□□ 0.71
ATG4B-217ENST00000475693 PLAGL2Q9UPG8 496 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 CALCAP01258 141 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 KRT19P08727 400 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 SELPP16109 830 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 PIK3CAP42336 1068 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 MYL6P60660 151 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 PCBP1Q15365 356 aaKnown RBP eCLIP19.51■□□□□ 0.712e-7■■□□□ 14.5
ATG4B-217ENST00000475693 USP37Q86T82 979 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 WDR49Q8IV35 697 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 CNGA4Q8IV77 575 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 PPM1KQ8N3J5 372 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 NAA15Q9BXJ9 866 aaKnown RBP19.51■□□□□ 0.71
ATG4B-217ENST00000475693 IFIH1Q9BYX4 1025 aaKnown RBP19.51■□□□□ 0.71
ATG4B-217ENST00000475693 PLCB1Q9NQ66 1216 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 FAM105AQ9NUU6 356 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 CEP72Q9P209 647 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 APEX2Q9UBZ4 518 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 COQ4Q9Y3A0 265 aa19.51■□□□□ 0.71
ATG4B-217ENST00000475693 TMEM191BP0C7N4 346 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 TRIM14Q14142 442 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 DUOXA2Q1HG44 320 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 FIGNQ5HY92 759 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 PDXDC1Q6P996 788 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 C1orf127Q8N9H9 656 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 KIF12Q96FN5 646 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 DNAJC7Q99615 494 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 GPR88Q9GZN0 384 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 WNT8AQ9H1J5 351 aa19.5■□□□□ 0.71
ATG4B-217ENST00000475693 C11orf49Q9H6J7 331 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms