RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 LRRIQ3A6PVS8 624 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-224ENST00000475524 MEIS3P2A8K0S8 358 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 ZBBXA8MT70 800 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 PTGESO14684 152 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 GJB5O95377 273 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 THP07101 528 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
MCF2L-224ENST00000475524 PAX3P23760 479 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 HTRA4P83105 476 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-224ENST00000475524 DUOXA2Q1HG44 320 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 CMTR2Q8IYT2 770 aaKnown RBP16.41■□□□□ 0.22
MCF2L-224ENST00000475524 RNF169Q8NCN4 708 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 PLEKHO2Q8TD55 490 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 ANKRD36BP1Q96IX9 119 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 CASD1Q96PB1 797 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 UBE2OQ9C0C9 1292 aaKnown RBP16.41■□□□□ 0.22
MCF2L-224ENST00000475524 TMEM8AQ9HCN3 771 aa16.41■□□□□ 0.22
MCF2L-224ENST00000475524 GTPBP10A4D1E9 387 aaKnown RBP16.4■□□□□ 0.22
MCF2L-224ENST00000475524 TNNC2P02585 160 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 TNNI1P19237 187 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 KRT31Q15323 416 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 ZACNQ401N2 412 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 C1orf220Q5T0J3 134 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 JADE1Q6IE81 842 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 EFCAB13Q8IY85 973 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 LRRC43Q8N309 656 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 RNF214Q8ND24 703 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 FAM212AQ96EL1 285 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 ZFP42Q96MM3 310 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 UROC1Q96N76 676 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 RBSNQ9H1K0 784 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 KLK14Q9P0G3 267 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 CXXC1Q9P0U4 656 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-224ENST00000475524 ITGA11Q9UKX5 1188 aa16.4■□□□□ 0.22
MCF2L-224ENST00000475524 AFPP02771 609 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 NFICP08651 508 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 FGFR1P11362 822 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 ATP2A2P16615 1042 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 LRPAP1P30533 357 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 SCNN1GP51170 649 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 WNT7BP56706 349 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 DSC1Q08554 894 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 TUSC3Q13454 348 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 NAB2Q15742 525 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 VWA3BQ502W6 1294 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 DCAF17Q5H9S7 520 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 KRT39Q6A163 491 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 APTXQ7Z2E3 356 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 DDX27Q96GQ7 796 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 RNPC3Q96LT9 517 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 ZMAT2Q96NC0 199 aaKnown RBP16.39■□□□□ 0.21
MCF2L-224ENST00000475524 NDST4Q9H3R1 872 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 TBC1D13Q9NVG8 400 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 COQ4Q9Y3A0 265 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 INSL6Q9Y581 213 aa16.39■□□□□ 0.21
MCF2L-224ENST00000475524 C4BPAP04003 597 aaKnown RBP16.38■□□□□ 0.21
MCF2L-224ENST00000475524 ATP1A3P13637 1013 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 RPL9P32969 192 aaKnown RBP16.38■□□□□ 0.21
MCF2L-224ENST00000475524 FMO5P49326 533 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 MXI1P50539 228 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 COPB1P53618 953 aaKnown RBP16.38■□□□□ 0.21
MCF2L-224ENST00000475524 DLG4P78352 724 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 CETN1Q12798 172 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 KCNH2Q12809 1159 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 SHHQ15465 462 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 FILIP1LQ4L180 1135 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 MIIPQ5JXC2 388 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 SMYD5Q6GMV2 418 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 SARM1Q6SZW1 724 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-224ENST00000475524 RAD9AQ99638 391 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 TMEM175Q9BSA9 504 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 PTPRJQ12913 1337 aa16.38■□□□□ 0.21
MCF2L-224ENST00000475524 A0A1W2PPC1 479 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 TBKBP1A7MCY6 615 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 LGALS16A8MUM7 142 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 UPP2O95045 317 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 STAU1O95793 577 aaKnown RBP16.37■□□□□ 0.21
MCF2L-224ENST00000475524 TRIM49P0CI25 452 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 TRIM49CP0CI26 452 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 TFAMQ00059 246 aaKnown RBP16.37■□□□□ 0.21
MCF2L-224ENST00000475524 PPP3CAQ08209 521 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 C9orf50Q5SZB4 431 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 ZNF516Q92618 1163 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 FAXDC2Q96IV6 333 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
MCF2L-224ENST00000475524 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms