RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 BRCC3P46736 316 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 TRAPPC10P48553 1259 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 PEX3P56589 373 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 UPP1Q16831 310 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 MTSS1LQ765P7 747 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 APBB1IPQ7Z5R6 666 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-205ENST00000474996 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 C3orf58Q8NDZ4 430 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 SNX29Q8TEQ0 813 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 DDX27Q96GQ7 796 aaKnown RBP15.78■□□□□ 0.12
COL2A1-205ENST00000474996 UROC1Q96N76 676 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 CDT1Q9H211 546 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 DNMT3BQ9UBC3 853 aaKnown RBP15.78■□□□□ 0.12
COL2A1-205ENST00000474996 R4GN57 208 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 CACNA1IQ9P0X4 2223 aa15.78■□□□□ 0.12
COL2A1-205ENST00000474996 CITO14578 2027 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 PHLPP2Q6ZVD8 1323 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 SMIM28A0A1B0GU29 152 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 E9PMD0 336 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 LRRN2O75325 713 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 POU2F2P09086 479 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 GLULP15104 373 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 GRM5P41594 1212 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 NPTX2P47972 431 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 YARSP54577 528 aaKnown RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 STARD6P59095 220 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 OSTNP61366 133 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 HMGN5P82970 282 aaKnown RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 SOX4Q06945 474 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 SNW1Q13573 536 aaKnown RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 UVSSAQ2YD98 709 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 PABPC1LQ4VXU2 614 aaKnown RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 ANKS3Q6ZW76 656 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 NPAS3Q8IXF0 933 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 PJA1Q8NG27 643 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 ING5Q8WYH8 240 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 ACO2Q99798 780 aaKnown RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 KXD1Q9BQD3 176 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 CCDC94Q9BW85 323 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-205ENST00000474996 BACE2Q9Y5Z0 518 aa15.77■□□□□ 0.12
COL2A1-205ENST00000474996 EP300Q09472 2414 aaPredicted RBP15.77■□□□□ 0.11
COL2A1-205ENST00000474996 FANCMQ8IYD8 2048 aa15.77■□□□□ 0.11
COL2A1-205ENST00000474996 WDR87Q6ZQQ6 2873 aa15.77■□□□□ 0.11
COL2A1-205ENST00000474996 PP2D1A8MPX8 630 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 TRAPPC3O43617 180 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 HIP1RO75146 1068 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 TOB1P50616 345 aaPredicted RBP15.76■□□□□ 0.11
COL2A1-205ENST00000474996 PTGDRQ13258 359 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 PDIA5Q14554 519 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 C1orf210Q8IVY1 113 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 DAW1Q8N136 415 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 IGSF22Q8N9C0 903 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 SHDQ96IW2 340 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 TOPORSQ9NS56 1045 aaPredicted RBP15.76■□□□□ 0.11
COL2A1-205ENST00000474996 KCNH3Q9ULD8 1083 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 MRPS23Q9Y3D9 190 aaKnown RBP15.76■□□□□ 0.11
COL2A1-205ENST00000474996 PCDHB6Q9Y5E3 794 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 DCHS1Q96JQ0 3298 aa15.76■□□□□ 0.11
COL2A1-205ENST00000474996 PODXLO00592 558 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 LMNAP02545 664 aaKnown RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 SP9P0CG40 484 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 ROR1Q01973 937 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 DMP1Q13316 513 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 MLF2Q15773 248 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 SLC44A4Q53GD3 710 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 XKR4Q5GH76 650 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 ALKAL1Q6UXT8 129 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 TAS1R3Q7RTX0 852 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 ZSCAN31Q96LW9 406 aaPredicted RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 ZMAT2Q96NC0 199 aaKnown RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 RUSC1Q9BVN2 902 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 MRPL4Q9BYD3 311 aaKnown RBP15.75■□□□□ 0.11
COL2A1-205ENST00000474996 RAB34Q9BZG1 259 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 SEMA4AQ9H3S1 761 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 TMEM134Q9H6X4 195 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 KMT5AQ9NQR1 393 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 ARHGAP28Q9P2N2 729 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 DNM3Q9UQ16 869 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 STK24Q9Y6E0 443 aa15.75■□□□□ 0.11
COL2A1-205ENST00000474996 KANSL1LA0AUZ9 987 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 RHOP08100 348 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 U2AF2P26368 475 aaKnown RBP eCLIP15.74■□□□□ 0.111e-5■□□□□ 9.3
COL2A1-205ENST00000474996 CDC25AP30304 524 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 ID4P47928 161 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 MAPK7Q13164 816 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 IL17AQ16552 155 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 SLC5A9Q2M3M2 681 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 VARS2Q5ST30 1063 aaKnown RBP15.74■□□□□ 0.11
COL2A1-205ENST00000474996 KRT79Q5XKE5 535 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 SLC8B1Q6J4K2 584 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 RINT1Q6NUQ1 792 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 RTL10Q7L3V2 364 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 KCNK18Q7Z418 384 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 ZNF461Q8TAF7 563 aa15.74■□□□□ 0.11
COL2A1-205ENST00000474996 MCRS1Q96EZ8 462 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms