RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
DDX39B-217ENST00000474961 LTBP2Q14767 1821 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 LRRC10BA6NIK2 292 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 HOXA2O43364 376 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 SERPINC1P01008 464 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 CXCL10P02778 98 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 CLTAP09496 248 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 RFC2P35250 354 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 MRE11P49959 708 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 VAMP7P51809 220 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 UBASH3AP57075 661 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 BFSP1Q12934 665 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 ENOX2Q16206 610 aaKnown RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 MAN2A1Q16706 1144 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 TCTN1Q2MV58 587 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 SARM1Q6SZW1 724 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 DEFB128Q7Z7B8 93 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 RTN4RL1Q86UN2 441 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 BRSK2Q8IWQ3 736 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 C7orf61Q8IZ16 206 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 SMG8Q8ND04 991 aaKnown RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 PLEKHO2Q8TD55 490 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 NAP1L5Q96NT1 182 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 ACAP3Q96P50 834 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 SPSB2Q99619 263 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 HTATIP2Q9BUP3 242 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 CCDC94Q9BW85 323 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 VPS16Q9H269 839 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 NXF3Q9H4D5 531 aaKnown RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 RPF1Q9H9Y2 349 aaKnown RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 FAM105AQ9NUU6 356 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 SNTG2Q9NY99 539 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 RBAKQ9NYW8 714 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 IFNKQ9P0W0 207 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 IPPQ9Y573 584 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 PCDHB2Q9Y5E7 798 aa10.33□□□□□ -0.76
DDX39B-217ENST00000474961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 TDRD15B5MCY1 1934 aaKnown RBP10.33□□□□□ -0.76
DDX39B-217ENST00000474961 ADH1BP00325 375 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 TPM2P07951 284 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 CXCL8P10145 99 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 WNT7BP56706 349 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 MCCD1P59942 119 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-217ENST00000474961 DLG4P78352 724 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 POU5F1Q01860 360 aaKnown RBP10.32□□□□□ -0.76
DDX39B-217ENST00000474961 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 ENPEPQ07075 957 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 PSMD6Q15008 389 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 FILIP1LQ4L180 1135 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 VWA3BQ502W6 1294 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 DCAF17Q5H9S7 520 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-217ENST00000474961 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 C1orf220Q5T0J3 134 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 TCERG1LQ5VWI1 586 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 FAM43BQ6ZT52 329 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-217ENST00000474961 MRPL10Q7Z7H8 261 aaKnown RBP10.32□□□□□ -0.76
DDX39B-217ENST00000474961 PARD3BQ8TEW8 1205 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 APBB2Q92870 758 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 SLC35C1Q96A29 364 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 CCDC127Q96BQ5 260 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 VWCEQ96DN2 955 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 APOL6Q9BWW8 343 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 FTHL17Q9BXU8 183 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 PDE11AQ9HCR9 933 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 RGS18Q9NS28 235 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 PRKAG2Q9UGJ0 569 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 HES2Q9Y543 173 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 TTC3P53804 2025 aa10.32□□□□□ -0.76
DDX39B-217ENST00000474961 A0A0U1RQF3 1178 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 TTC26A0AVF1 554 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 LRRIQ3A6PVS8 624 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-217ENST00000474961 LGALS16A8MUM7 142 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 LACTBL1A8MY62 500 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 C9IYK1 514 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
DDX39B-217ENST00000474961 ENPP3O14638 875 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 MEFVO15553 781 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-217ENST00000474961 CBFA2T2O43439 604 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 ZNF623O75123 536 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 RECQL4O94761 1208 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 IL18RAPO95256 599 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 TRIM49P0CI25 452 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 TRIM49CP0CI26 452 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 SKIP12755 728 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 ITGA4P13612 1032 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 CSF2RAP15509 400 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 IBSPP21815 317 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-217ENST00000474961 AKAP5P24588 427 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 RAB27AP51159 221 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 FAM189BP81408 668 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 KCNH2Q12809 1159 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 NR1I3Q14994 352 aa10.31□□□□□ -0.76
DDX39B-217ENST00000474961 SURF1Q15526 300 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms