RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SMC2O95347 1197 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 ADRB2P07550 413 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 STAG3L1P0CL83 205 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 MCF2P10911 925 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 IGFBP6P24592 240 aaPredicted RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 TNFSF9P41273 254 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 GRM5P41594 1212 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 LIG4P49917 911 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 RAB27AP51159 221 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 OSTNP61366 133 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 DLX2Q07687 328 aaPredicted RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 NOLC1Q14978 699 aaKnown RBP eCLIP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 NFKBIBQ15653 356 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 NAB2Q15742 525 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 ENOX2Q16206 610 aaKnown RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 SLC10A6Q3KNW5 377 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 ZNF568Q3ZCX4 644 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 COBLL1Q53SF7 1204 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 XKR4Q5GH76 650 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 ZNF658Q5TYW1 1059 aaPredicted RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 SCARA3Q6AZY7 606 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 THNSL1Q8IYQ7 743 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 GUF1Q8N442 669 aaKnown RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 RNF169Q8NCN4 708 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 HELQQ8TDG4 1101 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 MRPL38Q96DV4 380 aaKnown RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 FAM84AQ96KN4 292 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 ZMAT2Q96NC0 199 aaKnown RBP7.63□□□□□ -1.19
LIMD1-204ENST00000474665 GAD1Q99259 594 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 RAD9AQ99638 391 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 C17orf80Q9BSJ5 609 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 GBP3Q9H0R5 595 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 NUP62CLQ9H1M0 184 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 AGPAT3Q9NRZ7 376 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 DMAC2Q9NW81 257 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 KLK14Q9P0G3 267 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 PCDHB7Q9Y5E2 793 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 DMDP11532 3685 aa7.63□□□□□ -1.19
LIMD1-204ENST00000474665 MAP1BP46821 2468 aaKnown RBP7.62□□□□□ -1.19
LIMD1-204ENST00000474665 UBE4BO95155 1302 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 TTC26A0AVF1 554 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 GOLGA8IPA6NC78 632 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 ARL5CA6NH57 179 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 GOLGA8JA6NMD2 632 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 TBKBP1A7MCY6 615 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CLIC2O15247 247 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 OGTO15294 1046 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CLDN3O15551 220 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 DDHD2O94830 711 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 MBD3O95983 291 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 HARSP12081 509 aaKnown RBP7.62□□□□□ -1.19
LIMD1-204ENST00000474665 ITGA4P13612 1032 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 MLH1P40692 756 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 ACOT2P49753 483 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 NCBP1Q09161 790 aaKnown RBP7.62□□□□□ -1.19
LIMD1-204ENST00000474665 DPCR1Q3MIW9 517 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 DCAF4L1Q3SXM0 396 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CENPPQ6IPU0 288 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 ZNF280BQ86YH2 543 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CBWD2Q8IUF1 395 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 C12orf56Q8IXR9 622 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 FBXO22Q8NEZ5 403 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 PLEKHO2Q8TD55 490 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 TMEM174Q8WUU8 243 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 SAAL1Q96ER3 474 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 BICD1Q96G01 975 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 TCHPQ9BT92 498 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 MSTO1Q9BUK6 570 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 APOL6Q9BWW8 343 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 TMEM117Q9H0C3 514 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 PCIF1Q9H4Z3 704 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CWH43Q9H720 699 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 RSAD1Q9HA92 442 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 TBC1D13Q9NVG8 400 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CACNG4Q9UBN1 327 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 CPSF3Q9UKF6 684 aaKnown RBP7.62□□□□□ -1.19
LIMD1-204ENST00000474665 MRPL42Q9Y6G3 142 aaKnown RBP7.62□□□□□ -1.19
LIMD1-204ENST00000474665 VWA8A3KMH1 1905 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 PLXNA4Q9HCM2 1894 aa7.62□□□□□ -1.19
LIMD1-204ENST00000474665 SMIM28A0A1B0GU29 152 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TRIM49BA6NDI0 452 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 LACTBL1A8MY62 500 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 F8W810 466 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 PDXKO00764 312 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CLTAP09496 248 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CXCL8P10145 99 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 SKIP12755 728 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 GARTP22102 1010 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 ABCD1P33897 745 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CASP4P49662 377 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 SCNN1GP51170 649 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 NUBP1P53384 320 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 MCCD1P59942 119 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 SOX4Q06945 474 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 DSC1Q08554 894 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 COL19A1Q14993 1142 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 ZBTB6Q15916 424 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TMEM132AQ24JP5 1023 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 KLHL40Q2TBA0 621 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 PAN2Q504Q3 1202 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms