RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PRMT8Q9NR22 394 aaPredicted RBP22.31■■□□□ 1.16
APP-215ENST00000474136 ZFHX4Q86UP3 3567 aa22.3■■□□□ 1.16
APP-215ENST00000474136 ZMYM2Q9UBW7 1377 aa22.3■■□□□ 1.16
APP-215ENST00000474136 A0A087WWV3 80 aa22.3■■□□□ 1.16
APP-215ENST00000474136 DTNBO60941 627 aa22.3■■□□□ 1.16
APP-215ENST00000474136 XBP1P17861 261 aa22.3■■□□□ 1.16
APP-215ENST00000474136 OR1D2P34982 312 aa22.3■■□□□ 1.16
APP-215ENST00000474136 NUCB2P80303 420 aa22.3■■□□□ 1.16
APP-215ENST00000474136 MTAPQ13126 283 aa22.3■■□□□ 1.16
APP-215ENST00000474136 RAB33AQ14088 237 aa22.3■■□□□ 1.16
APP-215ENST00000474136 LPAL2Q16609 132 aa22.3■■□□□ 1.16
APP-215ENST00000474136 PIK3AP1Q6ZUJ8 805 aa22.3■■□□□ 1.16
APP-215ENST00000474136 OXER1Q8TDS5 423 aa22.3■■□□□ 1.16
APP-215ENST00000474136 EIF2AK1Q9BQI3 630 aaKnown RBP22.3■■□□□ 1.16
APP-215ENST00000474136 RTKNQ9BST9 563 aa22.3■■□□□ 1.16
APP-215ENST00000474136 NFKBIZQ9BYH8 718 aa22.3■■□□□ 1.16
APP-215ENST00000474136 POLR3FQ9H1D9 316 aaPredicted RBP22.3■■□□□ 1.16
APP-215ENST00000474136 GJB4Q9NTQ9 266 aa22.3■■□□□ 1.16
APP-215ENST00000474136 SNTG2Q9NY99 539 aa22.3■■□□□ 1.16
APP-215ENST00000474136 KCNH3Q9ULD8 1083 aa22.3■■□□□ 1.16
APP-215ENST00000474136 MRPS23Q9Y3D9 190 aaKnown RBP22.3■■□□□ 1.16
APP-215ENST00000474136 NOTCH4Q99466 2003 aa22.29■■□□□ 1.16
APP-215ENST00000474136 TTLL13PA6NNM8 815 aa22.29■■□□□ 1.16
APP-215ENST00000474136 TBC1D4O60343 1298 aa22.29■■□□□ 1.16
APP-215ENST00000474136 JAK2O60674 1132 aa22.29■■□□□ 1.16
APP-215ENST00000474136 DGAT1O75907 488 aa22.29■■□□□ 1.16
APP-215ENST00000474136 POU2F2P09086 479 aa22.29■■□□□ 1.16
APP-215ENST00000474136 RPS9P46781 194 aaKnown RBP22.29■■□□□ 1.16
APP-215ENST00000474136 NAB2Q15742 525 aa22.29■■□□□ 1.16
APP-215ENST00000474136 SLC5A9Q2M3M2 681 aa22.29■■□□□ 1.16
APP-215ENST00000474136 EARS2Q5JPH6 523 aaKnown RBP22.29■■□□□ 1.16
APP-215ENST00000474136 LARP1BQ659C4 914 aaKnown RBP22.29■■□□□ 1.16
APP-215ENST00000474136 ZNF852Q6ZMS4 543 aa22.29■■□□□ 1.16
APP-215ENST00000474136 NELL2Q99435 816 aa22.29■■□□□ 1.16
APP-215ENST00000474136 ARID2Q68CP9 1835 aa22.29■■□□□ 1.16
APP-215ENST00000474136 NCAM2O15394 837 aa22.28■■□□□ 1.16
APP-215ENST00000474136 ECI2O75521 394 aa22.28■■□□□ 1.16
APP-215ENST00000474136 UVSSAQ2YD98 709 aa22.28■■□□□ 1.16
APP-215ENST00000474136 TANGO2Q6ICL3 276 aa22.28■■□□□ 1.16
APP-215ENST00000474136 MAEAQ7L5Y9 396 aa22.28■■□□□ 1.16
APP-215ENST00000474136 GPRC5CQ9NQ84 441 aa22.28■■□□□ 1.16
APP-215ENST00000474136 CHMP5Q9NZZ3 219 aa22.28■■□□□ 1.16
APP-215ENST00000474136 GMEB2Q9UKD1 530 aa22.28■■□□□ 1.16
APP-215ENST00000474136 USP20Q9Y2K6 914 aa22.28■■□□□ 1.16
APP-215ENST00000474136 FAM205CA6NFA0 338 aa22.27■■□□□ 1.16
APP-215ENST00000474136 LRRIQ4A6NIV6 560 aa22.27■■□□□ 1.16
APP-215ENST00000474136 RECQL4O94761 1208 aa22.27■■□□□ 1.16
APP-215ENST00000474136 THP07101 528 aa22.27■■□□□ 1.16
APP-215ENST00000474136 RHOP08100 348 aa22.27■■□□□ 1.16
APP-215ENST00000474136 CEBPBP17676 345 aa22.27■■□□□ 1.16
APP-215ENST00000474136 DDIT3P35638 169 aa22.27■■□□□ 1.16
APP-215ENST00000474136 ADCY1Q08828 1119 aa22.27■■□□□ 1.16
APP-215ENST00000474136 TRIM29Q14134 588 aa22.27■■□□□ 1.16
APP-215ENST00000474136 HSD17B14Q9BPX1 270 aa22.27■■□□□ 1.16
APP-215ENST00000474136 ANKEF1Q9NU02 776 aa22.27■■□□□ 1.16
APP-215ENST00000474136 NDRG2Q9UN36 371 aaKnown RBP22.27■■□□□ 1.16
APP-215ENST00000474136 MAP1BP46821 2468 aaKnown RBP22.26■■□□□ 1.15
APP-215ENST00000474136 USO1O60763 962 aaKnown RBP22.26■■□□□ 1.15
APP-215ENST00000474136 LYPLA2O95372 231 aa22.26■■□□□ 1.15
APP-215ENST00000474136 ADRB1P08588 477 aa22.26■■□□□ 1.15
APP-215ENST00000474136 TDGF1P13385 188 aa22.26■■□□□ 1.15
APP-215ENST00000474136 FDPSP14324 419 aaKnown RBP22.26■■□□□ 1.15
APP-215ENST00000474136 RARRES1P49788 294 aa22.26■■□□□ 1.15
APP-215ENST00000474136 SPEM2Q0P670 501 aa22.26■■□□□ 1.15
APP-215ENST00000474136 ELAVL2Q12926 359 aaKnown RBP22.26■■□□□ 1.15
APP-215ENST00000474136 GRM2Q14416 872 aa22.26■■□□□ 1.15
APP-215ENST00000474136 PDXDC1Q6P996 788 aa22.26■■□□□ 1.15
APP-215ENST00000474136 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.26■■□□□ 1.15
APP-215ENST00000474136 PPP4R3CPQ6ZMV5 832 aa22.26■■□□□ 1.15
APP-215ENST00000474136 ZNF687Q8N1G0 1237 aa22.26■■□□□ 1.15
APP-215ENST00000474136 PIGOQ8TEQ8 1089 aa22.26■■□□□ 1.15
APP-215ENST00000474136 PDZD7Q9H5P4 517 aa22.26■■□□□ 1.15
APP-215ENST00000474136 MTRRQ9UBK8 725 aa22.26■■□□□ 1.15
APP-215ENST00000474136 MRPS17Q9Y2R5 130 aaKnown RBP22.26■■□□□ 1.15
APP-215ENST00000474136 CDY1Q9Y6F8 540 aa22.26■■□□□ 1.15
APP-215ENST00000474136 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.26■■□□□ 1.15
APP-215ENST00000474136 NRG2O14511 850 aaPredicted RBP22.25■■□□□ 1.15
APP-215ENST00000474136 FGFR3P22607 806 aa22.25■■□□□ 1.15
APP-215ENST00000474136 ST3GAL2Q16842 350 aa22.25■■□□□ 1.15
APP-215ENST00000474136 NOSTRINQ8IVI9 506 aa22.25■■□□□ 1.15
APP-215ENST00000474136 SLFN12Q8IYM2 578 aa22.25■■□□□ 1.15
APP-215ENST00000474136 C8orf76Q96K31 380 aa22.25■■□□□ 1.15
APP-215ENST00000474136 CCDC43Q96MW1 224 aaKnown RBP22.25■■□□□ 1.15
APP-215ENST00000474136 PRMT7Q9NVM4 692 aaPredicted RBP22.25■■□□□ 1.15
APP-215ENST00000474136 GDE1Q9NZC3 331 aa22.25■■□□□ 1.15
APP-215ENST00000474136 F5P12259 2224 aa22.24■■□□□ 1.15
APP-215ENST00000474136 VWA8A3KMH1 1905 aa22.24■■□□□ 1.15
APP-215ENST00000474136 H3BQV1 296 aa22.24■■□□□ 1.15
APP-215ENST00000474136 BAG4O95429 457 aaKnown RBP22.24■■□□□ 1.15
APP-215ENST00000474136 SYT1P21579 422 aa22.24■■□□□ 1.15
APP-215ENST00000474136 FAM126AQ9BYI3 521 aaPredicted RBP22.24■■□□□ 1.15
APP-215ENST00000474136 CHRDQ9H2X0 955 aa22.24■■□□□ 1.15
APP-215ENST00000474136 FZD8Q9H461 694 aa22.24■■□□□ 1.15
APP-215ENST00000474136 CHD8Q9HCK8 2581 aa22.24■■□□□ 1.15
APP-215ENST00000474136 I3L4J1 428 aa22.23■■□□□ 1.15
APP-215ENST00000474136 STX6O43752 255 aa22.23■■□□□ 1.15
APP-215ENST00000474136 FCARP24071 287 aa22.23■■□□□ 1.15
APP-215ENST00000474136 TKTP29401 623 aaKnown RBP22.23■■□□□ 1.15
APP-215ENST00000474136 GLRA4Q5JXX5 417 aa22.23■■□□□ 1.15
APP-215ENST00000474136 CD300LGQ6UXG3 332 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms