RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 AOC2O75106 756 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 CST3P01034 146 aaPredicted RBP19.39■□□□□ 0.69
VARS2-206ENST00000473916 MMEP08473 750 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 CXCL8P10145 99 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 ARF4P18085 180 aaPredicted RBP19.39■□□□□ 0.69
VARS2-206ENST00000473916 DNA2P51530 1060 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 WHAMMP3Q1A5X7 153 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 RUFY4Q6ZNE9 571 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 SCLT1Q96NL6 688 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 MMS19Q96T76 1030 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 PDZD7Q9H5P4 517 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 PRMT7Q9NVM4 692 aaPredicted RBP19.39■□□□□ 0.69
VARS2-206ENST00000473916 SNX12Q9UMY4 172 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 GINS2Q9Y248 185 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 TNFSF13BQ9Y275 285 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 NUB1Q9Y5A7 615 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 PCDHGC5Q9Y5F6 944 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 TRIP11Q15643 1979 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 MYADML2A6NDP7 307 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 KRT5P13647 590 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 ZSCAN20P17040 1043 aaPredicted RBP19.38■□□□□ 0.69
VARS2-206ENST00000473916 ZNF200P98182 395 aaPredicted RBP19.38■□□□□ 0.69
VARS2-206ENST00000473916 GCNT1Q02742 428 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 MFSD10Q14728 455 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 IFNLR1Q8IU57 520 aaPredicted RBP19.38■□□□□ 0.69
VARS2-206ENST00000473916 ARHGEF26Q96DR7 871 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 CDHR5Q9HBB8 845 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 OSGEPQ9NPF4 335 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 SMARCAL1Q9NZC9 954 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 EHD2Q9NZN4 543 aa19.38■□□□□ 0.69
VARS2-206ENST00000473916 BTNL10A8MVZ5 291 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 ZC3H11AO75152 810 aaKnown RBP eCLIP19.37■□□□□ 0.697e-22■■■■■ 33.3
VARS2-206ENST00000473916 CLSTN1O94985 981 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 MYL3P08590 195 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 CYP11B1P15538 503 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 PSMC4P43686 418 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 NOP2P46087 812 aaKnown RBP19.37■□□□□ 0.69
VARS2-206ENST00000473916 FMO1Q01740 532 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 NCOA4Q13772 614 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 FMNL3Q8IVF7 1028 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 SMC1BQ8NDV3 1235 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 VTI1AQ96AJ9 217 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 MAP7D2Q96T17 732 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 THAP2Q9H0W7 228 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 CEP350Q5VT06 3117 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 PHACTR2O75167 634 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 NOP14P78316 857 aaKnown RBP19.37■□□□□ 0.69
VARS2-206ENST00000473916 POU5F1BQ06416 359 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 TUBB2AQ13885 445 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 FAM187BQ17R55 369 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 WDR44Q5JSH3 913 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 FBXO38Q6PIJ6 1188 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 WDR49Q8IV35 697 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 CEP112Q8N8E3 955 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 NOA1Q8NC60 698 aaKnown RBP19.37■□□□□ 0.69
VARS2-206ENST00000473916 TRIB2Q92519 343 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 TUBB2BQ9BVA1 445 aa19.37■□□□□ 0.69
VARS2-206ENST00000473916 CHORDC1Q9UHD1 332 aaPredicted RBP19.37■□□□□ 0.69
VARS2-206ENST00000473916 CITO14578 2027 aa19.36■□□□□ 0.69
VARS2-206ENST00000473916 TSPAN1O60635 241 aa19.36■□□□□ 0.69
VARS2-206ENST00000473916 TFAMQ00059 246 aaKnown RBP19.36■□□□□ 0.69
VARS2-206ENST00000473916 TRIM32Q13049 653 aa19.36■□□□□ 0.69
VARS2-206ENST00000473916 DDX1Q92499 740 aaKnown RBP19.36■□□□□ 0.69
VARS2-206ENST00000473916 GOLGA1Q92805 767 aa19.36■□□□□ 0.69
VARS2-206ENST00000473916 OSBPL9Q96SU4 736 aa19.36■□□□□ 0.69
VARS2-206ENST00000473916 ZEB2O60315 1214 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 PSEN2P49810 448 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 MYL6P60660 151 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 LRRC57Q8N9N7 239 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 ADAMTS10Q9H324 1103 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 NCANO14594 1321 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 CLTAP09496 248 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 STAG3L1P0CL83 205 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 ACO1P21399 889 aaKnown RBP19.35■□□□□ 0.69
VARS2-206ENST00000473916 LACTBP83111 547 aaPredicted RBP19.35■□□□□ 0.69
VARS2-206ENST00000473916 IRF5Q13568 498 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 CUL2Q13617 745 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 CREG2Q8IUH2 290 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 TPCN2Q8NHX9 752 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 AP5M1Q9H0R1 490 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 INTUQ9ULD6 942 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 ATP8B3O60423 1300 aa19.35■□□□□ 0.69
VARS2-206ENST00000473916 CTAGE15A4D2H0 777 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 TREHO43280 583 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 ATMINO43313 823 aaPredicted RBP19.34■□□□□ 0.69
VARS2-206ENST00000473916 FTLP02792 175 aaPredicted RBP19.34■□□□□ 0.69
VARS2-206ENST00000473916 NFICP08651 508 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 TMEM253P0C7T8 217 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 CTAGE8P0CG41 777 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 PDE6CP51160 858 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 FSCN1Q16658 493 aaKnown RBP19.34■□□□□ 0.69
VARS2-206ENST00000473916 MEI1Q5TIA1 1274 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 CTAGE6Q86UF2 777 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 CTAGE4Q8IX94 777 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 SLC35G2Q8TBE7 412 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 OSMRQ99650 979 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 COG5Q9UP83 839 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 NRCAMQ92823 1304 aa19.34■□□□□ 0.69
VARS2-206ENST00000473916 MBLAC1A4D2B0 266 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms