RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 HSD11B2P80365 405 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 PPARAQ07869 468 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 KRT81Q14533 505 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 KRTAP27-1Q3LI81 207 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 SLC44A4Q53GD3 710 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 MFSD14BQ5SR56 506 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 PRAMEF14Q5SWL7 426 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 KIAA1161Q6NSJ0 714 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 UBE2R2Q712K3 238 aaPredicted RBP3.08□□□□□ -1.92
CCDC39-203ENST00000473854 AMIGO2Q86SJ2 522 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 PEG10Q86TG7 708 aaKnown RBP3.08□□□□□ -1.92
CCDC39-203ENST00000473854 ADAMTS15Q8TE58 950 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 NACC2Q96BF6 587 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 ZMAT4Q9H898 229 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 FAM30AQ9NZY2 134 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 KIAA1522Q9P206 1035 aaPredicted RBP3.08□□□□□ -1.92
CCDC39-203ENST00000473854 NUMBLQ9Y6R0 609 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 CCDC85CA6NKD9 419 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 ELL2O00472 640 aaPredicted RBP3.07□□□□□ -1.92
CCDC39-203ENST00000473854 PROM1O43490 865 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 KRT10P13645 584 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 MMP13P45452 471 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 VWA1Q6PCB0 445 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 DLK2Q6UY11 383 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 KRT73Q86Y46 540 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 FBXL20Q96IG2 436 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 TMEM79Q9BSE2 394 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 EBF3Q9H4W6 596 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 SIRPGQ9P1W8 387 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 PADI4Q9UM07 663 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 ZKSCAN5Q9Y2L8 839 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 PCDHB1Q9Y5F3 818 aa3.07□□□□□ -1.92
CCDC39-203ENST00000473854 CYSRT1A8MQ03 144 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 CBX4O00257 560 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 PLD2O14939 933 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 OPA1O60313 960 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 POMCP01189 267 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 MT3P25713 68 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 RAP2BP61225 183 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 SF3B3Q15393 1217 aaKnown RBP3.06□□□□□ -1.92
CCDC39-203ENST00000473854 ZNF260Q3ZCT1 412 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 GPR158Q5T848 1215 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 ZNF572Q7Z3I7 529 aaPredicted RBP3.06□□□□□ -1.92
CCDC39-203ENST00000473854 EFHBQ8N7U6 833 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 OR14C36Q8NHC7 312 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 SLC35B2Q8TB61 432 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 PGBD1Q96JS3 809 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 HAPLN3Q96S86 360 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 NCOA5Q9HCD5 579 aaKnown RBP3.06□□□□□ -1.92
CCDC39-203ENST00000473854 OXSMQ9NWU1 459 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 TUBA8Q9NY65 449 aaPredicted RBP3.06□□□□□ -1.92
CCDC39-203ENST00000473854 ELOVL5Q9NYP7 299 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 MOCS1Q9NZB8 636 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 MSRAQ9UJ68 235 aa3.06□□□□□ -1.92
CCDC39-203ENST00000473854 RPTORQ8N122 1335 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 CCDC187A0A096LP49 1063 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 FAM221BA6H8Z2 402 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 TMEM127O75204 238 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 LATS1O95835 1130 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 PTPN7P35236 360 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 MCAMP43121 646 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 NR4A2P43354 598 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 SP140Q13342 867 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 PTPRRQ15256 657 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 ZBTB41Q5SVQ8 909 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 PXDC1Q5TGL8 231 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 YTHDF3Q7Z739 585 aaKnown RBP3.05□□□□□ -1.92
CCDC39-203ENST00000473854 ZBTB8BQ8NAP8 495 aaPredicted RBP3.05□□□□□ -1.92
CCDC39-203ENST00000473854 PNKPQ96T60 521 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 MTMR4Q9NYA4 1195 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 PRSS50Q9UI38 385 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 KCNG1Q9UIX4 513 aa3.05□□□□□ -1.92
CCDC39-203ENST00000473854 GAS7O60861 476 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 ALAS1P13196 640 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 CTSSP25774 331 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 SREBF1P36956 1147 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 GEN1Q17RS7 908 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 PITRM1Q5JRX3 1037 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 FAM180AQ6UWF9 173 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 ABHD15Q6UXT9 468 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 ZNF782Q6ZMW2 699 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-203ENST00000473854 TFAP2BQ92481 460 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 MARK4Q96L34 752 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 INTS13Q9NVM9 706 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 IFT57Q9NWB7 429 aa3.04□□□□□ -1.92
CCDC39-203ENST00000473854 EVLQ9UI08 416 aaPredicted RBP3.04□□□□□ -1.92
CCDC39-203ENST00000473854 AATKQ6ZMQ8 1374 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 PPP6CO00743 305 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 TEX33O43247 280 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 TOP3BO95985 862 aaKnown RBP3.03□□□□□ -1.92
CCDC39-203ENST00000473854 IL2RBP14784 551 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 ATP5JP18859 108 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 TFF2Q03403 129 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 MST1LQ2TV78 715 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 FNDC3BQ53EP0 1204 aaKnown RBP3.03□□□□□ -1.92
CCDC39-203ENST00000473854 CREB3L3Q68CJ9 461 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 SLC18B1Q6NT16 456 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 KIF18BQ86Y91 864 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 NUP133Q8WUM0 1156 aa3.03□□□□□ -1.92
CCDC39-203ENST00000473854 NSMCE1Q8WV22 266 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms