RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 SERPINC1P01008 464 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 AFPP02771 609 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 FGFR1P11362 822 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 CLDN10P78369 228 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 FANCCQ00597 558 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 MIIPQ5JXC2 388 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 CLLU1OSQ5K130 101 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 JADE1Q6IE81 842 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 GLB1LQ6UWU2 654 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 ALKAL1Q6UXT8 129 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 ZMAT2Q96NC0 199 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 VPS16Q9H269 839 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 C2CD2Q9Y426 696 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 INPPL1O15357 1258 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 HOXA2O43364 376 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 OFD1O75665 1012 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 TMEM191BP0C7N4 346 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 KCNE1P15382 129 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 GCLMP48507 274 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 FMO5P49326 533 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 RGS19P49795 217 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 GATMP50440 423 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 MXI1P50539 228 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 SCNN1GP51170 649 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 AFF1P51825 1210 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 MCCD1P59942 119 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 TFAMQ00059 246 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 MYL7Q01449 175 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 KCNH2Q12809 1159 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 GSE1Q14687 1217 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 NT5DC4Q86YG4 428 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 ABI1Q8IZP0 508 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 GSTCDQ8NEC7 633 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 OR5B17Q8NGF7 314 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 URGCPQ8TCY9 931 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 HERVK_113Q902F9 699 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 MTMR12Q9C0I1 747 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 MTIF3Q9H2K0 278 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 NDST4Q9H3R1 872 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 CXXC1Q9P0U4 656 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 IFNKQ9P0W0 207 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 DERAQ9Y315 318 aa13.58□□□□□ -0.24
TRAPPC12-217ENST00000473348 PLXNA4Q9HCM2 1894 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 H0YGN5 161 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 POMCP01189 267 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 TNNC2P02585 160 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 GTF2H1P32780 548 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 AP3M2P53677 418 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 GRIK3Q13003 919 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 DUOXA2Q1HG44 320 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 FAM117BQ6P1L5 589 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 SARM1Q6SZW1 724 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 TMCO2Q7Z6W1 182 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 ZNF516Q92618 1163 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 C18orf25Q96B23 403 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 ANKRD36BP1Q96IX9 119 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 PPP1R10Q96QC0 940 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 TMEM117Q9H0C3 514 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 TMEM8AQ9HCN3 771 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 MIOSQ9NXC5 875 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 TUBGCP4Q9UGJ1 667 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 UBQLN1Q9UMX0 589 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 PLAGL2Q9UPG8 496 aa13.57□□□□□ -0.24
TRAPPC12-217ENST00000473348 VWA8A3KMH1 1905 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 A0A1B0GTH6 734 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 LRRC10BA6NIK2 292 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 N4BP1O75113 896 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 THP07101 528 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 UBASH3AP57075 661 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 SOX4Q06945 474 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 BIRC3Q13489 604 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 ZACNQ401N2 412 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 FKBP15Q5T1M5 1219 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 TDRD10Q5VZ19 366 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 KRT39Q6A163 491 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 TMEM130Q8N3G9 435 aa13.56□□□□□ -0.24
TRAPPC12-217ENST00000473348 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms