RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 KLHL10Q6JEL2 608 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
PRKCB-205ENST00000472066 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 NELFBQ8WX92 580 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-205ENST00000472066 KIF12Q96FN5 646 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 FAM161BQ96MY7 647 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 TSG101Q99816 390 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 SLC38A7Q9NVC3 462 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 DERAQ9Y315 318 aa13.38□□□□□ -0.27
PRKCB-205ENST00000472066 TRIM49BA6NDI0 452 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 CASTOR2A6NHX0 329 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 TULP1O00294 542 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-205ENST00000472066 FGF18O76093 207 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 PPM1AP35813 382 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 CASP4P49662 377 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 PLCB3Q01970 1234 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 SOX4Q06945 474 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-205ENST00000472066 CYP24A1Q07973 514 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 GPM6BQ13491 265 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 NFKBIBQ15653 356 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 CEP135Q66GS9 1140 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 Q7L0L9 218 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 SLC39A11Q8N1S5 342 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 SYAP1Q96A49 352 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-205ENST00000472066 UROC1Q96N76 676 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 C11orf84Q9BUA3 381 aaPredicted RBP13.37□□□□□ -0.27
PRKCB-205ENST00000472066 COLEC11Q9BWP8 271 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 PRDM12Q9H4Q4 367 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 GOLGA2P5Q9HBQ8 144 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 CACNG4Q9UBN1 327 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
PRKCB-205ENST00000472066 FRMD4BQ9Y2L6 1034 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
PRKCB-205ENST00000472066 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 F8W810 466 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 CETN3O15182 167 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 XPOTO43592 962 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 AKAP3O75969 853 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 ITGB1P05556 798 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 NFICP08651 508 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 CYP3A5P20815 502 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 CLCNKBP51801 687 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 STX17P56962 302 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 FKBP3Q00688 224 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 KRT17Q04695 432 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 PAK1Q13153 545 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 TMEM132DQ14C87 1099 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 PSMD6Q15008 389 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 SURF1Q15526 300 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 UPP1Q16831 310 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 DPCR1Q3MIW9 517 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 SPATA1Q5VX52 437 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 FOXR2Q6PJQ5 311 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 TMEM173Q86WV6 379 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 ZC3H3Q8IXZ2 948 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 SPPL3Q8TCT6 385 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 BCL7CQ8WUZ0 217 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 EEF2KMTQ96G04 330 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 DDX27Q96GQ7 796 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 IGSF21Q96ID5 467 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 DUSP9Q99956 384 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 ALG13Q9NP73 1137 aaKnown RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 TUBGCP4Q9UGJ1 667 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 CTNND2Q9UQB3 1225 aa13.36□□□□□ -0.27
PRKCB-205ENST00000472066 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-205ENST00000472066 TRIOBPQ9H2D6 2365 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 MAPK13O15264 365 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 GRM6O15303 877 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-205ENST00000472066 LRPAP1P30533 357 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
PRKCB-205ENST00000472066 DCLRE1AQ6PJP8 1040 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 TMEM130Q8N3G9 435 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
PRKCB-205ENST00000472066 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 FNBP1Q96RU3 617 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
PRKCB-205ENST00000472066 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-205ENST00000472066 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
PRKCB-205ENST00000472066 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
PRKCB-205ENST00000472066 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms