RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 UBASH3BQ8TF42 649 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 SCFD2Q8WU76 684 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 AUTS2Q8WXX7 1259 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 APBB2Q92870 758 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 MYADMQ96S97 322 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 PAIP2Q9BPZ3 127 aaKnown RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 RPP25Q9BUL9 199 aaKnown RBP5.05□□□□□ -1.6
LMNB1-205ENST00000472034 CLMPQ9H6B4 373 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 IGSF9Q9P2J2 1179 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 VTI1BQ9UEU0 232 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 ANAPC4Q9UJX5 808 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 RAXQ9Y2V3 346 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 DOPEY2Q9Y3R5 2298 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 FBN2P35556 2912 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 ATMQ13315 3056 aa5.05□□□□□ -1.6
LMNB1-205ENST00000472034 LOC100289279A0A1B0GTE1 492 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 FSD2A1L4K1 749 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 ANKRD62A6NC57 917 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GOLGA6CA6NDK9 693 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GOLGA6BA6NDN3 693 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 C2orf71A6NGG8 1288 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GAS2O43903 313 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 ADAM11O75078 769 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 ALX3O95076 343 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 SLFN14P0C7P3 912 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 FAM200BP0CF97 657 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GOLGA6DP0CG33 693 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 CASTP20810 708 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 SCP2P22307 547 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 MAOBP27338 520 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 NOS3P29474 1203 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GBP2P32456 591 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 CDK8P49336 464 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GPC5P78333 572 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 ATP8B2P98198 1209 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 EXOSC9Q06265 439 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 SCAPQ12770 1279 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 FZD5Q13467 585 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 LRRC14Q15048 493 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 WDR43Q15061 677 aaKnown RBP eCLIP5.04□□□□□ -1.66e-11■■■□□ 18.3
LMNB1-205ENST00000472034 HGSNATQ68CP4 663 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 C12orf50Q8NA57 414 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 COLGALT1Q8NBJ5 622 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 ATP6V0A1Q93050 837 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 TP53INP1Q96A56 240 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 BORCS6Q96GS4 357 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 DRC1Q96MC2 740 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 DDX23Q9BUQ8 820 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 ARRDC1-AS1Q9H2J1 176 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 AGO3Q9H9G7 860 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 KANSL2Q9H9L4 492 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 CBX8Q9HC52 389 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 METTL14Q9HCE5 456 aaKnown RBP5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GOLGA6AQ9NYA3 693 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 MSRB2Q9Y3D2 182 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 NEUROG3Q9Y4Z2 214 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 PCDHB12Q9Y5F1 795 aa5.04□□□□□ -1.6
LMNB1-205ENST00000472034 GREB1LQ9C091 1923 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 BAZ2AQ9UIF9 1905 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 URB1O60287 2271 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 BICDL2A1A5D9 508 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 C4orf47A7E2U8 309 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 CHURC1-FNTBB4DL54 471 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 TMEM232C9JQI7 657 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 PRKAB2O43741 272 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 PPFIA4O75335 1185 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 WISP1O95388 367 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 GH1P01241 217 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SMIM10L2AP0DMW4 78 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SMIM10L2BP0DMW5 78 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 MYBP10242 640 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 RLBP1P12271 317 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 NME2P22392 152 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 EDNRBP24530 442 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 CALML3P27482 149 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 CA8P35219 290 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 FNTBP49356 437 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 PSMC1P62191 440 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 ADCY1Q08828 1119 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 WTAPQ15007 396 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 DGKDQ16760 1214 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 LETM2Q2VYF4 491 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 FAM102BQ5T8I3 360 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 RNF43Q68DV7 783 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SEPT14Q6ZU15 432 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SV2BQ7L1I2 683 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 ARMCX6Q7L4S7 300 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 GPR149Q86SP6 731 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 STK11IPQ8N1F8 1099 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 AGGF1Q8N302 714 aaeCLIP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 MRPL43Q8N983 215 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 C3orf58Q8NDZ4 430 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 MRPS27Q92552 414 aaKnown RBP5.03□□□□□ -1.6
LMNB1-205ENST00000472034 SENP7Q9BQF6 1050 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 DBNDD2Q9BQY9 259 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 ANTXR1Q9H6X2 564 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 EHMT1Q9H9B1 1298 aa5.03□□□□□ -1.6
LMNB1-205ENST00000472034 LTB4R2Q9NPC1 389 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms