RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 ADRB1P08588 477 aa21.87■■□□□ 1.09
CCDC78-208ENST00000471861 ELAVL2Q12926 359 aaKnown RBP21.87■■□□□ 1.09
CCDC78-208ENST00000471861 LPAL2Q16609 132 aa21.87■■□□□ 1.09
CCDC78-208ENST00000471861 FAM187BQ17R55 369 aa21.87■■□□□ 1.09
CCDC78-208ENST00000471861 PDXDC1Q6P996 788 aa21.87■■□□□ 1.09
CCDC78-208ENST00000471861 PRMT7Q9NVM4 692 aaPredicted RBP21.87■■□□□ 1.09
CCDC78-208ENST00000471861 GDE1Q9NZC3 331 aa21.87■■□□□ 1.09
CCDC78-208ENST00000471861 TMEM189-UBE2V1I3L0A0 370 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 NCAM2O15394 837 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 TKTP29401 623 aaKnown RBP21.86■■□□□ 1.09
CCDC78-208ENST00000471861 MAEAQ7L5Y9 396 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 NOSTRINQ8IVI9 506 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 DDX27Q96GQ7 796 aaKnown RBP21.86■■□□□ 1.09
CCDC78-208ENST00000471861 NAP1L4Q99733 375 aaKnown RBP21.86■■□□□ 1.09
CCDC78-208ENST00000471861 CHRDQ9H2X0 955 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 AVENQ9NQS1 362 aaPredicted RBP21.86■■□□□ 1.09
CCDC78-208ENST00000471861 GMEB2Q9UKD1 530 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 CHD8Q9HCK8 2581 aa21.86■■□□□ 1.09
CCDC78-208ENST00000471861 WNT7AO00755 349 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 SPEM2Q0P670 501 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 SCRN1Q12765 414 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 NR5A1Q13285 461 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 GRM2Q14416 872 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 GLRA4Q5JXX5 417 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 PRSS36Q5K4E3 855 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 EEF1DP3Q658K8 133 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 C3orf58Q8NDZ4 430 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 BSNDQ8WZ55 320 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 DNASE1L2Q92874 299 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 TNFRSF25Q93038 417 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 ELSPBP1Q96BH3 223 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 TCEAL4Q96EI5 215 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 FAM126AQ9BYI3 521 aaPredicted RBP21.85■■□□□ 1.09
CCDC78-208ENST00000471861 NDRG2Q9UN36 371 aaKnown RBP21.85■■□□□ 1.09
CCDC78-208ENST00000471861 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.85■■□□□ 1.09
CCDC78-208ENST00000471861 USP24Q9UPU5 2620 aa21.85■■□□□ 1.09
CCDC78-208ENST00000471861 STK36Q9NRP7 1315 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 N4BP3O15049 544 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 CPLX2Q6PUV4 134 aaKnown RBP21.84■■□□□ 1.09
CCDC78-208ENST00000471861 RTL10Q7L3V2 364 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 PPP1R10Q96QC0 940 aaKnown RBP21.84■■□□□ 1.09
CCDC78-208ENST00000471861 CCDC113Q9H0I3 377 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 GOLGA2P5Q9HBQ8 144 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 MRPS17Q9Y2R5 130 aaKnown RBP21.84■■□□□ 1.09
CCDC78-208ENST00000471861 BACE2Q9Y5Z0 518 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 F5P12259 2224 aa21.84■■□□□ 1.09
CCDC78-208ENST00000471861 NCANO14594 1321 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 I3L4J1 428 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 B3GAT3O94766 335 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 BAG4O95429 457 aaKnown RBP21.83■■□□□ 1.09
CCDC78-208ENST00000471861 CCR2P41597 374 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 CLCNKBP51801 687 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 ST3GAL2Q16842 350 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 CENPQQ7L2Z9 268 aaPredicted RBP21.83■■□□□ 1.09
CCDC78-208ENST00000471861 CCDC43Q96MW1 224 aaKnown RBP21.83■■□□□ 1.09
CCDC78-208ENST00000471861 TTC12Q9H892 705 aaPredicted RBP21.83■■□□□ 1.09
CCDC78-208ENST00000471861 PCDHA12Q9UN75 941 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 GDAQ9Y2T3 454 aa21.83■■□□□ 1.09
CCDC78-208ENST00000471861 ARHGEF37A1IGU5 675 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 SPATA31C1P0DKV0 1188 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 BRCC3P46736 316 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 RBM25P49756 843 aaKnown RBP21.82■■□□□ 1.08
CCDC78-208ENST00000471861 ROR1Q01973 937 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 FAM78AQ5JUQ0 283 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 MAMSTRQ6ZN01 415 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 ZBTB8OSQ8IWT0 167 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 CYP46A1Q9Y6A2 500 aa21.82■■□□□ 1.08
CCDC78-208ENST00000471861 TICRRQ7Z2Z1 1910 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 WDR27A2RRH5 827 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 SLC30A4O14863 429 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 PRKCBP05771 671 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 PRPF4BQ13523 1007 aaKnown RBP21.81■■□□□ 1.08
CCDC78-208ENST00000471861 CALCRLQ16602 461 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 UPP1Q16831 310 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 PPM1JQ5JR12 505 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 LAIR1Q6GTX8 287 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 SLC8B1Q6J4K2 584 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 BRD9Q9H8M2 597 aa21.81■■□□□ 1.08
CCDC78-208ENST00000471861 ABLIM3O94929 683 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 CTDNEP1O95476 244 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 SOX4Q06945 474 aaPredicted RBP21.8■■□□□ 1.08
CCDC78-208ENST00000471861 GAS6Q14393 721 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 VITQ6UXI7 678 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 ANKS3Q6ZW76 656 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 MAP4K3Q8IVH8 894 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 NETO1Q8TDF5 533 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 ASB16Q96NS5 453 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 CORO1BQ9BR76 489 aa21.8■■□□□ 1.08
CCDC78-208ENST00000471861 ACKR2O00590 384 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 MAN2B1O00754 1011 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 CDKL5O76039 1030 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 REC8O95072 547 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 SEC24AO95486 1093 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 XRCC6P12956 609 aaKnown RBP eCLIP21.79■■□□□ 1.08
CCDC78-208ENST00000471861 PTPN2P17706 415 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 XBP1P17861 261 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 SATB1Q01826 763 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 DMWDQ09019 674 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 MAPK6Q16659 721 aa21.79■■□□□ 1.08
CCDC78-208ENST00000471861 CELF5Q8N6W0 485 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms