RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ZNF568Q3ZCX4 644 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 PRSS55Q6UWB4 352 aaPredicted RBP20.64■□□□□ 0.89
COMMD1-207ENST00000471704 ALKAL1Q6UXT8 129 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 LNX1Q8TBB1 728 aaPredicted RBP20.64■□□□□ 0.89
COMMD1-207ENST00000471704 PIK3R5Q8WYR1 880 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 SMG7Q92540 1137 aaKnown RBP20.64■□□□□ 0.89
COMMD1-207ENST00000471704 RAD54LQ92698 747 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 CALML4Q96GE6 196 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 EPSTI1Q96J88 318 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 TTPALQ9BTX7 342 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 HAPLN2Q9GZV7 340 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 IGSF9Q9P2J2 1179 aa20.64■□□□□ 0.89
COMMD1-207ENST00000471704 ANK1P16157 1881 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 CLUHO75153 1309 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 OSTNP61366 133 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
COMMD1-207ENST00000471704 XKR4Q5GH76 650 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 FAM171A1Q5VUB5 890 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 CD300LGQ6UXG3 332 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 GPBP1Q86WP2 473 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 TMEM105Q8N8V8 129 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 SNX21Q969T3 373 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 CLIC6Q96NY7 704 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 CLSTN3Q9BQT9 956 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 PRKD2Q9BZL6 878 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 CCSER1Q9C0I3 900 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 GOLGA2P5Q9HBQ8 144 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 EPS15L1Q9UBC2 864 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 GTF3C3Q9Y5Q9 886 aa20.63■□□□□ 0.89
COMMD1-207ENST00000471704 ZFHX2Q9C0A1 2572 aaPredicted RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 MCF2P10911 925 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 ZNF131P52739 623 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 CEBPZQ03701 1054 aaKnown RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 SOX4Q06945 474 aaPredicted RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 ELAVL2Q12926 359 aaKnown RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 ASTLQ6HA08 431 aaPredicted RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 MPZL3Q6UWV2 235 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 GLYCTKQ8IVS8 523 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 STAMQ92783 540 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 KCNN1Q92952 543 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 ZMAT2Q96NC0 199 aaKnown RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 USP28Q96RU2 1077 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 MYADMQ96S97 322 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 FIZ1Q96SL8 496 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 ODF2LQ9ULJ1 636 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 DUSP12Q9UNI6 340 aa20.62■□□□□ 0.89
COMMD1-207ENST00000471704 SRPRBQ9Y5M8 271 aaKnown RBP20.62■□□□□ 0.89
COMMD1-207ENST00000471704 SMIM28A0A1B0GU29 152 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 TMEM189-UBE2V1I3L0A0 370 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 GALR2O43603 387 aaPredicted RBP20.61■□□□□ 0.89
COMMD1-207ENST00000471704 STX6O43752 255 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 ZMYND10O75800 440 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 CLCN5P51795 746 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 SEZ6Q53EL9 994 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 C3orf58Q8NDZ4 430 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 SNX27Q96L92 541 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 IRF2BPLQ9H1B7 796 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 FBXW11Q9UKB1 542 aa20.61■□□□□ 0.89
COMMD1-207ENST00000471704 VPS13AQ96RL7 3174 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 NPR3P17342 541 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 FGFR3P22607 806 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 CLCNKBP51801 687 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 PSMD5Q16401 504 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 DCLRE1AQ6PJP8 1040 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 HAUS6Q7Z4H7 955 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 APBB1IPQ7Z5R6 666 aaPredicted RBP20.6■□□□□ 0.89
COMMD1-207ENST00000471704 LARP4BQ92615 738 aaKnown RBP20.6■□□□□ 0.89
COMMD1-207ENST00000471704 CCDC94Q9BW85 323 aaPredicted RBP20.6■□□□□ 0.89
COMMD1-207ENST00000471704 LARSQ9P2J5 1176 aaKnown RBP20.6■□□□□ 0.89
COMMD1-207ENST00000471704 ANKFY1Q9P2R3 1169 aa20.6■□□□□ 0.89
COMMD1-207ENST00000471704 ADAM12O43184 909 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 TOM1L1O75674 476 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 HARSP12081 509 aaKnown RBP20.59■□□□□ 0.89
COMMD1-207ENST00000471704 GBP2P32456 591 aaPredicted RBP20.59■□□□□ 0.89
COMMD1-207ENST00000471704 SMTNP53814 917 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 STRN3Q13033 797 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 NOLC1Q14978 699 aaKnown RBP eCLIP20.59■□□□□ 0.89
COMMD1-207ENST00000471704 UPP1Q16831 310 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 PDXDC1Q6P996 788 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 ZPBP2Q6X784 338 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.59■□□□□ 0.89
COMMD1-207ENST00000471704 CEP57Q86XR8 500 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 TMEM130Q8N3G9 435 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 RSAD2Q8WXG1 361 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 NXPE3Q969Y0 559 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 PIDD1Q9HB75 910 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.59■□□□□ 0.89
COMMD1-207ENST00000471704 CNTN3Q9P232 1028 aa20.59■□□□□ 0.89
COMMD1-207ENST00000471704 MORC2Q9Y6X9 1032 aaPredicted RBP20.59■□□□□ 0.89
COMMD1-207ENST00000471704 A0A087X0B3 334 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 LAMP2P13473 410 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 DDIT3P35638 169 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 MCL1Q07820 350 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 RAB33AQ14088 237 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 SLC10A6Q3KNW5 377 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 CWF19L1Q69YN2 538 aaKnown RBP20.58■□□□□ 0.89
COMMD1-207ENST00000471704 SLC44A3Q8N4M1 653 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 RASSF8Q8NHQ8 419 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 UROC1Q96N76 676 aa20.58■□□□□ 0.89
COMMD1-207ENST00000471704 TCHPQ9BT92 498 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms