RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 NBPF8Q3BBV2 869 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 LONRF3Q496Y0 759 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 PHF19Q5T6S3 580 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 PPP4R3AQ6IN85 833 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 CERS3Q8IU89 383 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 SMC5Q8IY18 1101 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 UNC5BQ8IZJ1 945 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 PPP1R35Q8TAP8 253 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 NKD2Q969F2 451 aaPredicted RBP7.02□□□□□ -1.29
CKS1B-204ENST00000471245 SYT3Q9BQG1 590 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 DMRT3Q9NQL9 472 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 KMT5AQ9NQR1 393 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 INTUQ9ULD6 942 aa7.02□□□□□ -1.29
CKS1B-204ENST00000471245 SPATA31A1Q5TZJ5 1347 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 YTHDC2Q9H6S0 1430 aaKnown RBP7.01□□□□□ -1.29
CKS1B-204ENST00000471245 PEAK1Q9H792 1746 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 ETV2O00321 342 aaPredicted RBP7.01□□□□□ -1.29
CKS1B-204ENST00000471245 SLC16A6O15403 523 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 RPLP2P05387 115 aaKnown RBP7.01□□□□□ -1.29
CKS1B-204ENST00000471245 GSPT1P15170 499 aaKnown RBP7.01□□□□□ -1.29
CKS1B-204ENST00000471245 C1QTNF8P60827 252 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 FOXO4P98177 505 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 IL31Q6EBC2 164 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 KIAA0319LQ8IZA0 1049 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 GPR156Q8NFN8 814 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 RIN2Q8WYP3 895 aaPredicted RBP7.01□□□□□ -1.29
CKS1B-204ENST00000471245 HOXB13Q92826 284 aaPredicted RBP7.01□□□□□ -1.29
CKS1B-204ENST00000471245 WDR92Q96MX6 357 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 VWA7Q9Y334 891 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 PIK3C2GO75747 1445 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 CEP350Q5VT06 3117 aa7.01□□□□□ -1.29
CKS1B-204ENST00000471245 WNK3Q9BYP7 1800 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 PMM2O15305 246 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 SGTAO43765 313 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 PHF2O75151 1096 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 LY86O95711 162 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 LTA4HP09960 611 aaKnown RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 MYBP10242 640 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 HTR1BP28222 390 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 ADCY8P40145 1251 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 NEK3P51956 506 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 AGFG1P52594 562 aaKnown RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 GJA9P57773 515 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 SESN2P58004 480 aaPredicted RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 EIF4HQ15056 248 aaKnown RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 PKN1Q16512 942 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 ZNF648Q5T619 568 aaPredicted RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 THEMIS2Q5TEJ8 643 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 STRBPQ96SI9 672 aaKnown RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 B3GNT5Q9BYG0 378 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 KCNK12Q9HB15 430 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7□□□□□ -1.29
CKS1B-204ENST00000471245 DNAI1Q9UI46 699 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 CROTQ9UKG9 612 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 FAM50BQ9Y247 325 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 STXBP5LQ9Y2K9 1186 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 ITSN1Q15811 1721 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 ANKARQ7Z5J8 1434 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 AKAP12Q02952 1782 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 RPTORQ8N122 1335 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 LMO7Q8WWI1 1683 aa7□□□□□ -1.29
CKS1B-204ENST00000471245 ENDOD1O94919 500 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 LDHAP00338 332 aaKnown RBP6.99□□□□□ -1.29
CKS1B-204ENST00000471245 ALDH2P05091 517 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 C8AP07357 584 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 CTSSP25774 331 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 POLD1P28340 1107 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 ETV4P43268 484 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 HTR3AP46098 478 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 CACNB3P54284 484 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 EPHB3P54753 998 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 ZNF280AP59817 542 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-204ENST00000471245 DSC2Q02487 901 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 CD69Q07108 199 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 TOP3AQ13472 1001 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-204ENST00000471245 MST1LQ2TV78 715 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 ANO6Q4KMQ2 910 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 PRR31Q5SQ13 230 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 CCDC149Q6ZUS6 474 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 TTC7BQ86TV6 843 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 FAM129CQ86XR2 697 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 IFNL2Q8IZJ0 200 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 FAM156AQ8NDB6 213 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 OR2I1PQ8NGU4 316 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.99□□□□□ -1.29
CKS1B-204ENST00000471245 NSUN6Q8TEA1 469 aaKnown RBP6.99□□□□□ -1.29
CKS1B-204ENST00000471245 DPF2Q92785 391 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 RGMAQ96B86 450 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 NOX5Q96PH1 765 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 CGRRF1Q99675 332 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 C7orf25Q9BPX7 421 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 LRFN3Q9BTN0 628 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 CD320Q9NPF0 282 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 L1RE1Q9UN81 338 aa6.99□□□□□ -1.29
CKS1B-204ENST00000471245 LRRC37A3O60309 1634 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 GAAP10253 952 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 RAP1GAPP47736 663 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 CAP1Q01518 475 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 IL10RAQ13651 578 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms