RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PJA1Q8NG27 643 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 FGF14Q92915 247 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 SHDQ96IW2 340 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 MTMR9Q96QG7 549 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 CLSTN3Q9BQT9 956 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 PAAF1Q9BRP4 392 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 DDX23Q9BUQ8 820 aaKnown RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 TMEM60Q9H2L4 133 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 FZD8Q9H461 694 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 LMBRD1Q9NUN5 540 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 PARP2Q9UGN5 583 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 FBXO2Q9UK22 296 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 CDH7Q9ULB5 785 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 PCDHA7Q9UN72 937 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 SRPRBQ9Y5M8 271 aaKnown RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 R4GN57 208 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 ZNF292O60281 2723 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 LRRIQ4A6NIV6 560 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 USO1O60763 962 aaKnown RBP9.97□□□□□ -0.81
SF3A1-206ENST00000471037 C8AP07357 584 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 SP9P0CG40 484 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 GLULP15104 373 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 PSMD5Q16401 504 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 SPECC1Q5M775 1068 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 FAM171A1Q5VUB5 890 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 PDXDC1Q6P996 788 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 PARM1Q6UWI2 310 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 DTHD1Q6ZMT9 781 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 MTSS1LQ765P7 747 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 GRASPQ7Z6J2 395 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-206ENST00000471037 RABGGTAQ92696 567 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 BORCS6Q96GS4 357 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 RPP25Q9BUL9 199 aaKnown RBP9.97□□□□□ -0.81
SF3A1-206ENST00000471037 RAB34Q9BZG1 259 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 PDZD7Q9H5P4 517 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 GPRC5CQ9NQ84 441 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 CACNG4Q9UBN1 327 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 FANCMQ8IYD8 2048 aa9.97□□□□□ -0.81
SF3A1-206ENST00000471037 KANSL1LA0AUZ9 987 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 CASTOR2A6NHX0 329 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 POTEMA6NI47 508 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 TMEM189-UBE2V1I3L0A0 370 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 N4BP3O15049 544 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 XYLBO75191 536 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 RECQL4O94761 1208 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 MBD3O95983 291 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 THP07101 528 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 SPATA31C1P0DKV0 1188 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 LONP1P36776 959 aaKnown RBP9.96□□□□□ -0.82
SF3A1-206ENST00000471037 TXKP42681 527 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.825e-6■■□□□ 12.9
SF3A1-206ENST00000471037 GPC5P78333 572 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 PRKCQQ04759 706 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 RAB33AQ14088 237 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 UVSSAQ2YD98 709 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 ZNF528Q3MIS6 628 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 PPM1LQ5SGD2 360 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 AXDND1Q5T1B0 1012 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-206ENST00000471037 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-206ENST00000471037 RTL10Q7L3V2 364 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 ZBTB8OSQ8IWT0 167 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 MAML2Q8IZL2 1156 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-206ENST00000471037 HASPINQ8TF76 798 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 RUBCNQ92622 972 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 FGF13Q92913 245 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 RMDN1Q96DB5 314 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 AK8Q96MA6 479 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 OSBPL6Q9BZF3 934 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 FOXQ1Q9C009 403 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 CCDC113Q9H0I3 377 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 TUFT1Q9NNX1 390 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 SNTG2Q9NY99 539 aa9.96□□□□□ -0.82
SF3A1-206ENST00000471037 EP300Q09472 2414 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-206ENST00000471037 VWA3AA6NCI4 1184 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 TTLL13PA6NNM8 815 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 ACKR2O00590 384 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 ADAM12O43184 909 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 GADD45BO75293 160 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-206ENST00000471037 FGFR3P22607 806 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 CMA1P23946 247 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 MAGEA9P43362 315 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 NTHL1P78549 312 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 PFKPQ01813 784 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 PRPF4BQ13523 1007 aaKnown RBP9.95□□□□□ -0.82
SF3A1-206ENST00000471037 MLF2Q15773 248 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-206ENST00000471037 MAPK6Q16659 721 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-206ENST00000471037 RSPO2Q6UXX9 243 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-206ENST00000471037 CATSPER3Q86XQ3 398 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 CEP57Q86XR8 500 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 SUMF1Q8NBK3 374 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 SLC7A14Q8TBB6 771 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 BSNDQ8WZ55 320 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms