RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RBP3P10745 1247 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 MGAT1P26572 445 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 SREBF1P36956 1147 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 KRT85P78386 507 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 DGCR2P98153 550 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 BMT2Q1RMZ1 405 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 RABL3Q5HYI8 236 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 ZNF572Q7Z3I7 529 aaPredicted RBP5.44□□□□□ -1.54
COL9A1-206ENST00000470652 TRMT2AQ8IZ69 625 aaKnown RBP5.44□□□□□ -1.54
COL9A1-206ENST00000470652 HOXB13Q92826 284 aaPredicted RBP5.44□□□□□ -1.54
COL9A1-206ENST00000470652 MTMR8Q96EF0 704 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 CYFIP2Q96F07 1278 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 CFAP74Q9C0B2 1584 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 CCDC8Q9H0W5 538 aaPredicted RBP5.44□□□□□ -1.54
COL9A1-206ENST00000470652 RRP7BPQ9NSQ0 103 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 INO80Q9ULG1 1556 aaPredicted RBP5.44□□□□□ -1.54
COL9A1-206ENST00000470652 YEATS2Q9ULM3 1422 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 DNM3Q9UQ16 869 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 WASHC2CQ9Y4E1 1318 aa5.44□□□□□ -1.54
COL9A1-206ENST00000470652 ARAP3Q8WWN8 1544 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 POGZQ7Z3K3 1410 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 NPIPB8E9PQR5 432 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 GABRDO14764 452 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 PJA2O43164 708 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 MT-CO1P00395 513 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 IL2RBP14784 551 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 EVA1CP58658 441 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 SP140Q13342 867 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 MFSD14BQ5SR56 506 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 EFCAB2Q5VUJ9 269 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 FAM177A1Q8N128 213 aaPredicted RBP5.43□□□□□ -1.54
COL9A1-206ENST00000470652 PQLC1Q8N2U9 271 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 REPS2Q8NFH8 660 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.43□□□□□ -1.54
COL9A1-206ENST00000470652 ZFP28Q8NHY6 868 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 LANCL2Q9NS86 450 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 MOCS1Q9NZB8 636 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 SAP30BPQ9UHR5 308 aaKnown RBP5.43□□□□□ -1.54
COL9A1-206ENST00000470652 NOP58Q9Y2X3 529 aaKnown RBP5.43□□□□□ -1.54
COL9A1-206ENST00000470652 SPEF1Q9Y4P9 236 aa5.43□□□□□ -1.54
COL9A1-206ENST00000470652 KDM5CP41229 1560 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 ARHGEF5Q12774 1597 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 DIP2CQ9Y2E4 1556 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 MIA2Q96PC5 1412 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 GRXCR1A8MXD5 290 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 TRIM24O15164 1050 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 SNRPA1P09661 255 aaKnown RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 GUCY1A2P33402 732 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 WASP42768 502 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 ACAP2Q15057 778 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 RRP12Q5JTH9 1297 aaKnown RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 ANKS6Q68DC2 871 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 JADE3Q92613 823 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 TFAP2CQ92754 450 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 FUBP3Q96I24 572 aaKnown RBP eCLIP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 DCLRE1CQ96SD1 692 aaKnown RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 C7orf25Q9BPX7 421 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 NDC1Q9BTX1 674 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 SENP6Q9GZR1 1112 aaPredicted RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 HOMER2Q9NSB8 354 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 TMEM140Q9NV12 185 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 POGKQ9P215 609 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 EIF2B4Q9UI10 523 aaKnown RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 SORCS3Q9UPU3 1222 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 DENND4BO75064 1496 aaPredicted RBP5.42□□□□□ -1.54
COL9A1-206ENST00000470652 CCDC141Q6ZP82 1450 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 NEO1Q92859 1461 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 ATP7AQ04656 1500 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 HECW2Q9P2P5 1572 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 ATRNL1Q5VV63 1379 aa5.42□□□□□ -1.54
COL9A1-206ENST00000470652 C9orf84Q5VXU9 1444 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 GCC2Q8IWJ2 1684 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 TEX14Q8IWB6 1497 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 DIRC3C9JPN6 131 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 TEX33O43247 280 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
COL9A1-206ENST00000470652 NARSO43776 548 aaKnown RBP5.41□□□□□ -1.54
COL9A1-206ENST00000470652 NDUFS2O75306 463 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 SCAF4O95104 1147 aaKnown RBP5.41□□□□□ -1.54
COL9A1-206ENST00000470652 ZNF202O95125 648 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 ALOX15P16050 662 aaPredicted RBP5.41□□□□□ -1.54
COL9A1-206ENST00000470652 MCM7P33993 719 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 CLRN1P58418 232 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 TGFB2P61812 414 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 SLC25A3Q00325 362 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 SEPT2Q15019 361 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 CPT1CQ8TCG5 803 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 SLC25A43Q8WUT9 341 aaPredicted RBP5.41□□□□□ -1.54
COL9A1-206ENST00000470652 CASKIN2Q8WXE0 1202 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 SLC13A1Q9BZW2 595 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 KCNH6Q9H252 994 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 MANSC1Q9H8J5 431 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 INTUQ9ULD6 942 aa5.41□□□□□ -1.54
COL9A1-206ENST00000470652 ARHGEF40Q8TER5 1519 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 CXorf49A8MYA2 514 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms