RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TNNC2P02585 160 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 SELPP16109 830 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 ZSCAN20P17040 1043 aaPredicted RBP16.34■□□□□ 0.21
COL4A5-203ENST00000470339 YARSP54577 528 aaKnown RBP16.34■□□□□ 0.21
COL4A5-203ENST00000470339 NFX1Q12986 1120 aaKnown RBP16.34■□□□□ 0.21
COL4A5-203ENST00000470339 TWF2Q6IBS0 349 aaKnown RBP16.34■□□□□ 0.21
COL4A5-203ENST00000470339 ALKAL1Q6UXT8 129 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 RRAGAQ7L523 313 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 ENOSF1Q7L5Y1 443 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 HACE1Q8IYU2 909 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 OR5B17Q8NGF7 314 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 SEMA4DQ92854 862 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 ANKRD36BP1Q96IX9 119 aa16.34■□□□□ 0.21
COL4A5-203ENST00000470339 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
COL4A5-203ENST00000470339 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 MEFVO15553 781 aaPredicted RBP16.33■□□□□ 0.2
COL4A5-203ENST00000470339 ZNF623O75123 536 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 PHACTR2O75167 634 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 PARNO95453 639 aaKnown RBP16.33■□□□□ 0.2
COL4A5-203ENST00000470339 HLA-DRAP01903 254 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 TMEM191BP0C7N4 346 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 SKIP12755 728 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 RAB27AP51159 221 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 JAM2P57087 298 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 BIRC3Q13489 604 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 DSC3Q14574 896 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 XKR4Q5GH76 650 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 WDR44Q5JSH3 913 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 IQCEQ6IPM2 695 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 FAXDC2Q96IV6 333 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 NLRC4Q9NPP4 1024 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.33■□□□□ 0.2
COL4A5-203ENST00000470339 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 FHOD1Q9Y613 1164 aa16.33■□□□□ 0.2
COL4A5-203ENST00000470339 LRRC53A6NM62 1247 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 VNN1O95497 513 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 GHRP10912 638 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 CD52P31358 61 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 PIK3CAP42336 1068 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 MFAP3P55082 362 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 APBA1Q02410 837 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 NCOA4Q13772 614 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 TMEM132DQ14C87 1099 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 SGSM1Q2NKQ1 1148 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 LMBRD2Q68DH5 695 aaPredicted RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 JADE1Q6IE81 842 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 LRRC8DQ7L1W4 858 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 MRPL10Q7Z7H8 261 aaKnown RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 EFCAB13Q8IY85 973 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 TNS4Q8IZW8 715 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 SMG8Q8ND04 991 aaKnown RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 KIAA1524Q8TCG1 905 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 TAF4BQ92750 862 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 SNX27Q96L92 541 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 SPAG5Q96R06 1193 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 TMEM106CQ9BVX2 250 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 UBE2TQ9NPD8 197 aaPredicted RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 CNTN3Q9P232 1028 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 IPPQ9Y573 584 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 PCDHB2Q9Y5E7 798 aa16.32■□□□□ 0.2
COL4A5-203ENST00000470339 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 BZW2Q9Y6E2 419 aaKnown RBP16.32■□□□□ 0.2
COL4A5-203ENST00000470339 TANC1Q9C0D5 1861 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
COL4A5-203ENST00000470339 RECQL4O94761 1208 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 KCNE1P15382 129 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 STAT1P42224 750 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 GCNT1Q02742 428 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 ZBTB6Q15916 424 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 CCDC170Q8IYT3 715 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 MTMR12Q9C0I1 747 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 NXF3Q9H4D5 531 aaKnown RBP16.31■□□□□ 0.2
COL4A5-203ENST00000470339 KCND1Q9NSA2 647 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 C1orf112Q9NSG2 853 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 FAM105AQ9NUU6 356 aa16.31■□□□□ 0.2
COL4A5-203ENST00000470339 KIAA0100Q14667 2235 aaKnown RBP16.3■□□□□ 0.2
COL4A5-203ENST00000470339 ESPNB1AK53 854 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 PQBP1O60828 265 aaKnown RBP16.3■□□□□ 0.2
COL4A5-203ENST00000470339 ASS1P00966 412 aaKnown RBP16.3■□□□□ 0.2
COL4A5-203ENST00000470339 SERPING1P05155 500 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 NFICP08651 508 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 FERP16591 822 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 MSNP26038 577 aaKnown RBP16.3■□□□□ 0.2
COL4A5-203ENST00000470339 ATICP31939 592 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 TRPC3Q13507 836 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 MBTPS1Q14703 1052 aa16.3■□□□□ 0.2
COL4A5-203ENST00000470339 DRAP1Q14919 205 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms