RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 COL4A3Q01955 1670 aa9.87□□□□□ -0.83
SYNGAP1-205ENST00000470232 CEP295Q9C0D2 2601 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 FASNP49327 2511 aaKnown RBP9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 INO80B-WBP1J3KQ70 363 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 SLC27A2O14975 620 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 ZNF263O14978 683 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 MICAL2O94851 1124 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 CHRNB1P11230 501 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 PSMC3P17980 439 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 AKAP5P24588 427 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 GDI1P31150 447 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 HOXA6P31267 233 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 OR1D2P34982 312 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 RCAN1P53805 252 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 POU5F1BQ06416 359 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 SPIRE1Q08AE8 756 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 PTGDRQ13258 359 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 DGKKQ5KSL6 1271 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 RNF20Q5VTR2 975 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 PLA2G4FQ68DD2 849 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 HEATR6Q6AI08 1181 aaKnown RBP9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 SLC27A1Q6PCB7 646 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 LRSAM1Q6UWE0 723 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 CLEC17AQ6ZS10 378 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 CACNA2D4Q7Z3S7 1137 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 FERMT3Q86UX7 667 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 WDR5BQ86VZ2 330 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 DEPDC1BQ8WUY9 529 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 COL26A1Q96A83 441 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 E2F7Q96AV8 911 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 CPB2Q96IY4 423 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 ESYT1Q9BSJ8 1104 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 DHX33Q9H6R0 707 aaKnown RBP9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 C8orf33Q9H7E9 229 aaPredicted RBP9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 NAP1L2Q9ULW6 460 aaPredicted RBP9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 PCDHGA5Q9Y5G8 931 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 ZZEF1O43149 2961 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 F5P12259 2224 aa9.86□□□□□ -0.83
SYNGAP1-205ENST00000470232 SHISA7A6NL88 538 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 C1QTNF9BB2RNN3 333 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 PRPF3O43395 683 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 TRAPPC3O43617 180 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 TSPAN1O60635 241 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 THP07101 528 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 P4HBP07237 508 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 C1QTNF9P0C862 333 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 C7P10643 843 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 CCNE1P24864 410 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 KPNA1P52294 538 aaPredicted RBP9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 NPEPPSP55786 919 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 PTENP60484 403 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 FGD1P98174 961 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 SRSF5Q13243 272 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 GRM2Q14416 872 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 SF3A2Q15428 464 aaKnown RBP9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 CYP4A22Q5TCH4 519 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 CREB3L3Q68CJ9 461 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 RNF43Q68DV7 783 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 MCTP1Q6DN14 999 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 PSAPL1Q6NUJ1 521 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 MAP4K3Q8IVH8 894 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 YAF2Q8IY57 180 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 ELMOD1Q8N336 334 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 GSTCDQ8NEC7 633 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 FAM200AQ8TCP9 573 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 RABGGTAQ92696 567 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 MTRQ99707 1265 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 GREB1Q4ZG55 1949 aa9.85□□□□□ -0.83
SYNGAP1-205ENST00000470232 CYP3A7-CYP3A51PA0A087WV96 503 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 KLF18A0A0U1RQI7 1052 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 PRRG1O14668 218 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 EPN2O95208 641 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 NPTXRO95502 500 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 CHRM1P11229 460 aaPredicted RBP9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 CEBPBP17676 345 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 CYP3A7P24462 503 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 CDC27P30260 824 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 MCM2P49736 904 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 KLHL40Q2TBA0 621 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 FAM78AQ5JUQ0 283 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 DAB2IPQ5VWQ8 1189 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 B3GNT9Q6UX72 402 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 ANKS3Q6ZW76 656 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 PDZD4Q76G19 769 aaPredicted RBP9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 DHX32Q7L7V1 743 aaKnown RBP9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 MFSD6LQ8IWD5 586 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 SYNPOQ8N3V7 929 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 TBCKQ8TEA7 893 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 HASPINQ8TF76 798 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 SMARCD2Q92925 531 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 ASB16Q96NS5 453 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 CORO1BQ9BR76 489 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 GPR88Q9GZN0 384 aa9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 NXF3Q9H4D5 531 aaKnown RBP9.84□□□□□ -0.83
SYNGAP1-205ENST00000470232 VPS45Q9NRW7 570 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms