RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TMEM140Q9NV12 185 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 FBXO34Q9NWN3 711 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 RNF181Q9P0P0 153 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 GPR45Q9Y5Y3 372 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 WASHC2AQ641Q2 1341 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 CCDC78A2IDD5 438 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 PRSS23O95084 383 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 POMCP01189 267 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 HKR1P10072 659 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 ITGAMP11215 1152 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 MXRA7P84157 204 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 FOXI1Q12951 378 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 UBXN2BQ14CS0 331 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 B3GNTL1Q67FW5 361 aaPredicted RBP7.25□□□□□ -1.25
COL11A1-208ENST00000470170 OTUD7BQ6GQQ9 843 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 UBE3BQ7Z3V4 1068 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.25□□□□□ -1.25
COL11A1-208ENST00000470170 SYNPO2LQ9H987 977 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 RUVBL1Q9Y265 456 aaKnown RBP7.25□□□□□ -1.25
COL11A1-208ENST00000470170 PRKAB1Q9Y478 270 aa7.25□□□□□ -1.25
COL11A1-208ENST00000470170 AATKQ6ZMQ8 1374 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 A0A1B0GTW7 788 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 KIAA0355O15063 1070 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 EGR2P11161 476 aaPredicted RBP7.24□□□□□ -1.25
COL11A1-208ENST00000470170 SEC24CP53992 1094 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 ABHD17BQ5VST6 288 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 DPY19L2P1Q6NXN4 242 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 TMEM132CQ8N3T6 1108 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 CASKIN2Q8WXE0 1202 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 COQ10AQ96MF6 247 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 ALOXE3Q9BYJ1 711 aa7.24□□□□□ -1.25
COL11A1-208ENST00000470170 REXO4Q9GZR2 422 aaKnown RBP7.24□□□□□ -1.25
COL11A1-208ENST00000470170 ZAR1LA6NP61 321 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 K7ESF4 209 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 GPR32O75388 356 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 FOSP01100 380 aaPredicted RBP7.23□□□□□ -1.25
COL11A1-208ENST00000470170 AMY1AP04745 511 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 TYRP1P17643 537 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 AGXTP21549 392 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 FGFR4P22455 802 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 PLA2G5P39877 138 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 SCAPQ12770 1279 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 KLF1Q13351 362 aaPredicted RBP7.23□□□□□ -1.25
COL11A1-208ENST00000470170 EGFLAMQ63HQ2 1017 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 SLC44A3Q8N4M1 653 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 ZGPATQ8N5A5 531 aaKnown RBP7.23□□□□□ -1.25
COL11A1-208ENST00000470170 PPM1NQ8N819 430 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 DPF2Q92785 391 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 RNF31Q96EP0 1072 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 RNPEPQ9H4A4 650 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 USP25Q9UHP3 1055 aa7.23□□□□□ -1.25
COL11A1-208ENST00000470170 FAM171A2A8MVW0 826 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 GCSHP23434 173 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 CLK3P49761 638 aaKnown RBP7.22□□□□□ -1.25
COL11A1-208ENST00000470170 HSD11B2P80365 405 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 MTM1Q13496 603 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 SPDYE7PQ495Y7 208 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 ARMC6Q6NXE6 501 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 SEM1Q6ZVN7 128 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 GPR149Q86SP6 731 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 ZNF277Q9NRM2 450 aaPredicted RBP7.22□□□□□ -1.25
COL11A1-208ENST00000470170 TESQ9UGI8 421 aaKnown RBP7.22□□□□□ -1.25
COL11A1-208ENST00000470170 NOX1Q9Y5S8 564 aa7.22□□□□□ -1.25
COL11A1-208ENST00000470170 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.25
COL11A1-208ENST00000470170 TEX33O43247 280 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 CXADRP78310 365 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 CLUL1Q15846 466 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 CNTD1Q8N815 330 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 NRG4Q8WWG1 115 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 CYFIP2Q96F07 1278 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.26
COL11A1-208ENST00000470170 TCRBV7S2A1N4TA0A589 114 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 GPANK1O95872 356 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 ATP8B2P98198 1209 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 DDX42Q86XP3 938 aaKnown RBP eCLIP7.2□□□□□ -1.26
COL11A1-208ENST00000470170 PRIMA1Q86XR5 153 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 RAB24Q969Q5 203 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 PRDM13Q9H4Q3 707 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 MANSC1Q9H8J5 431 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 MCM8Q9UJA3 840 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 INTUQ9ULD6 942 aa7.2□□□□□ -1.26
COL11A1-208ENST00000470170 MYBBP1AQ9BQG0 1328 aaKnown RBP7.2□□□□□ -1.26
COL11A1-208ENST00000470170 DDCP20711 480 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 FDXRP22570 491 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
COL11A1-208ENST00000470170 MPP3Q13368 585 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 STRIP1Q5VSL9 837 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 RHOT1Q8IXI2 618 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 NACC2Q96BF6 587 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 Q96MF0 132 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 C7orf25Q9BPX7 421 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 GSTO2Q9H4Y5 243 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 SLC5A4Q9NY91 659 aa7.19□□□□□ -1.26
COL11A1-208ENST00000470170 CDHR4A6H8M9 788 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 TRIM75PA6NK02 468 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 KIAA0391O15091 583 aaKnown RBP7.18□□□□□ -1.26
COL11A1-208ENST00000470170 ESRRBO95718 433 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 CKBP12277 381 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms