RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.48□□□□□ -1.53
COL3A1-205ENST00000470167 GPRC5BQ9NZH0 403 aa5.48□□□□□ -1.53
COL3A1-205ENST00000470167 MTRRQ9UBK8 725 aa5.48□□□□□ -1.53
COL3A1-205ENST00000470167 PCDHB12Q9Y5F1 795 aa5.48□□□□□ -1.53
COL3A1-205ENST00000470167 NR2E3Q9Y5X4 410 aa5.48□□□□□ -1.53
COL3A1-205ENST00000470167 CAPN7Q9Y6W3 813 aa5.48□□□□□ -1.53
COL3A1-205ENST00000470167 CTTNBP2Q8WZ74 1663 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 A0A1B0GWJ7 208 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 A0A1W2PP55 124 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 GOLGA8IPA6NC78 632 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SLC9B1P1A6NJY1 282 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CHURC1-FNTBB4DL54 471 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 FAM47E-STBD1D6RA91 191 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 F8W810 466 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 GCOM1H8Y6P7 765 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SGK1O00141 431 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 GPR25O00155 361 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MASP2O00187 686 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 LCE2BO14633 110 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 IRS4O14654 1257 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MAP2K7O14733 419 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 KPNA5O15131 536 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 POLR2DO15514 142 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MEFVO15553 781 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SRGAP3O43295 1099 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SOCS5O75159 536 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 NIPSNAP2O75323 286 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CLN5O75503 358 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CHRNA1P02708 482 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 LTA4HP09960 611 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MYZAPP0CAP1 466 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 COL6A2P12110 1019 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 HCLS1P14317 486 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ACPPP15309 386 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PRKACAP17612 351 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 RPS6KB1P23443 525 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PTGS2P35354 604 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PHKA1P46020 1223 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MTIF2P46199 727 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SULT1E1P49888 294 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SLC12A2P55011 1212 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MLLT6P55198 1093 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MYL6P60660 151 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 VBP1P61758 197 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CYP4F2P78329 520 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 MRPS25P82663 173 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 COG7P83436 770 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 TMPRSS15P98073 1019 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CACNB2Q08289 660 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CYP4F3Q08477 520 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ERCC6LQ2NKX8 1250 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CEP55Q53EZ4 464 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 COL13A1Q5TAT6 717 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PEAR1Q5VY43 1037 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 KANK2Q63ZY3 851 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SPECC1LQ69YQ0 1117 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 IL31Q6EBC2 164 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 KIAA1841Q6NSI8 718 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 BORAQ6PGQ7 559 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 C11orf88Q6PI97 169 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 OTOP3Q7RTS5 596 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 GPR142Q7Z601 462 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 KIAA0907Q7Z7F0 614 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 EPHX4Q8IUS5 362 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF619Q8N2I2 560 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 OR6S1Q8NH40 331 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PLBD2Q8NHP8 589 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PHOSPHO2Q8TCD6 241 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 OSCP1Q8WVF1 389 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SHC3Q92529 594 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 PMEPA1Q969W9 287 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 AZIN2Q96A70 460 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 NSMCE3Q96MG7 304 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CMTM3Q96MX0 182 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 JAKMIP1Q96N16 626 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ACAP3Q96P50 834 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 TUBGCP5Q96RT8 1024 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 C9orf16Q9BUW7 83 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 LSM14BQ9BX40 385 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 NUSAP1Q9BXS6 441 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SRCIN1Q9C0H9 1055 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 NDEL1Q9GZM8 345 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 NT5C3AQ9H0P0 336 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 SUV39H2Q9H5I1 410 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 WASH6PQ9NQA3 447 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 POLE3Q9NRF9 147 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 FAM8A1Q9UBU6 413 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 TRIM10Q9UDY6 481 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ADGRE2Q9UHX3 823 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ATXN7L1Q9ULK2 861 aaPredicted RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 CNOT6Q9ULM6 557 aaKnown RBP5.47□□□□□ -1.53
COL3A1-205ENST00000470167 NOX1Q9Y5S8 564 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ABCA10Q8WWZ4 1543 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 RTEL1-TNFRSF6BF6WH68 1400 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 ITIH6Q6UXX5 1313 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 UBN2Q6ZU65 1347 aa5.47□□□□□ -1.53
COL3A1-205ENST00000470167 POLA1P09884 1462 aaPredicted RBP5.46□□□□□ -1.53
COL3A1-205ENST00000470167 NSD2O96028 1365 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 INSRP06213 1382 aa5.46□□□□□ -1.54
COL3A1-205ENST00000470167 ANKRD30BQ9BXX2 1392 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms