RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 GAB3Q8WWW8 586 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 ZCCHC14Q8WYQ9 949 aaKnown RBP13.34□□□□□ -0.27
LSM2-209ENST00000470083 SMARCD2Q92925 531 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 C2orf42Q9NWW7 574 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 KLK14Q9P0G3 267 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 BRPF3Q9ULD4 1205 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 ASH1LQ9NR48 2969 aaKnown RBP13.34□□□□□ -0.27
LSM2-209ENST00000470083 LAMA5O15230 3695 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 RALGAPA1Q6GYQ0 2036 aa13.34□□□□□ -0.27
LSM2-209ENST00000470083 WDR27A2RRH5 827 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 INO80B-WBP1J3KQ70 363 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 ZNF197O14709 1029 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 GIPC1O14908 333 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 ZNF263O14978 683 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
LSM2-209ENST00000470083 ARF4P18085 180 aaPredicted RBP13.33□□□□□ -0.28
LSM2-209ENST00000470083 MPLP40238 635 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 QARSP47897 775 aaKnown RBP13.33□□□□□ -0.28
LSM2-209ENST00000470083 RCAN1P53805 252 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 SPIRE1Q08AE8 756 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 EMC2Q15006 297 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
LSM2-209ENST00000470083 TCEAL4Q96EI5 215 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 SMOC1Q9H4F8 434 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 VPS45Q9NRW7 570 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 PARP2Q9UGN5 583 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 ITPR1Q14643 2758 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 AKAP13Q12802 2813 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 WDR81Q562E7 1941 aa13.33□□□□□ -0.28
LSM2-209ENST00000470083 CCDC163A0A0D9SF12 145 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 DKC1O60832 514 aaKnown RBP eCLIP13.32□□□□□ -0.28
LSM2-209ENST00000470083 LRG1P02750 347 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 FGFR3P22607 806 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 HOXC13P31276 330 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 MBTD1Q05BQ5 628 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 MXD4Q14582 209 aaPredicted RBP13.32□□□□□ -0.28
LSM2-209ENST00000470083 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 CREB3L3Q68CJ9 461 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 SLC27A1Q6PCB7 646 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 ETNPPLQ8TBG4 499 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 EDEM2Q9BV94 578 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 C8orf33Q9H7E9 229 aaPredicted RBP13.32□□□□□ -0.28
LSM2-209ENST00000470083 TRPV4Q9HBA0 871 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
LSM2-209ENST00000470083 BACE2Q9Y5Z0 518 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 GREB1Q4ZG55 1949 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 COL4A2P08572 1712 aa13.32□□□□□ -0.28
LSM2-209ENST00000470083 CYP3A7-CYP3A51PA0A087WV96 503 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 AKAP3O75969 853 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 NPTXRO95502 500 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 TOP3BO95985 862 aaKnown RBP13.31□□□□□ -0.28
LSM2-209ENST00000470083 CYP3A7P24462 503 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 VIPR2P41587 438 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 CCR2P41597 374 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 POU5F1BQ06416 359 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 TFDP1Q14186 410 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 SH3PXD2AQ5TCZ1 1133 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 TCEAL6Q6IPX3 200 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 PDZD4Q76G19 769 aaPredicted RBP13.31□□□□□ -0.28
LSM2-209ENST00000470083 MFSD6LQ8IWD5 586 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 SYNPOQ8N3V7 929 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 CCDC148Q8NFR7 591 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 CSGALNACT1Q8TDX6 532 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 TCEAL3Q969E4 200 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 ZSWIM3Q96MP5 696 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
LSM2-209ENST00000470083 LSG1Q9H089 658 aaKnown RBP13.31□□□□□ -0.28
LSM2-209ENST00000470083 WRAP73Q9P2S5 460 aaPredicted RBP13.31□□□□□ -0.28
LSM2-209ENST00000470083 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 CCDC196A0A1B0GTZ2 297 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 A0A1B0GUA9 196 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 SLC38A8A6NNN8 435 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 EML1O00423 815 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 PRRG1O14668 218 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 PTGESO14684 152 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 B4GALT5O43286 388 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 TDP2O95551 362 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 THP07101 528 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 CEACAM1P13688 526 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 ADD1P35611 737 aaKnown RBP13.3□□□□□ -0.28
LSM2-209ENST00000470083 KPNA1P52294 538 aaPredicted RBP13.3□□□□□ -0.28
LSM2-209ENST00000470083 CCINQ13939 588 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 NAB2Q15742 525 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 DAB2IPQ5VWQ8 1189 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 TXNDC11Q6PKC3 985 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
LSM2-209ENST00000470083 ZNF461Q8TAF7 563 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 ZSCAN18Q8TBC5 510 aaPredicted RBP13.3□□□□□ -0.28
LSM2-209ENST00000470083 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 ZC3H10Q96K80 434 aaKnown RBP13.3□□□□□ -0.28
LSM2-209ENST00000470083 MTRQ99707 1265 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 NFKBIZQ9BYH8 718 aa13.3□□□□□ -0.28
LSM2-209ENST00000470083 NCANO14594 1321 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms