RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CFHR5Q9BXR6 569 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 UPF3AQ9H1J1 476 aaKnown RBP19.54■□□□□ 0.72
SMC4-211ENST00000469858 MOCS3O95396 460 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 STAG3L1P0CL83 205 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 TFAMQ00059 246 aaKnown RBP19.53■□□□□ 0.72
SMC4-211ENST00000469858 NCOA4Q13772 614 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 C10orf76Q5T2E6 689 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 DNAAF5Q86Y56 855 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 ZNF784Q8NCA9 323 aaPredicted RBP19.53■□□□□ 0.72
SMC4-211ENST00000469858 OLIG1Q8TAK6 271 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 U2AF1L4Q8WU68 220 aaKnown RBP19.53■□□□□ 0.72
SMC4-211ENST00000469858 SLC20A1Q8WUM9 679 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 ARID3AQ99856 593 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 SEPT11Q9NVA2 429 aaKnown RBP19.53■□□□□ 0.72
SMC4-211ENST00000469858 SRRDQ9UH36 339 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 SALL4Q9UJQ4 1053 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 CYP26A1O43174 497 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 MYCNP04198 464 aaPredicted RBP19.53■□□□□ 0.72
SMC4-211ENST00000469858 GNAT1P11488 350 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 ENOSF1Q7L5Y1 443 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 XPNPEP3Q9NQH7 507 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 NENFQ9UMX5 172 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 CAPN6Q9Y6Q1 641 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 CITO14578 2027 aa19.53■□□□□ 0.72
SMC4-211ENST00000469858 CLTAP09496 248 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 TMEM191BP0C7N4 346 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 TNFAIP3P21580 790 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 GTF2F1P35269 517 aaKnown RBP eCLIP19.52■□□□□ 0.728e-49■■■■■ 172.1
SMC4-211ENST00000469858 VEGFBP49765 207 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 DUOXA2Q1HG44 320 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 SCARA3Q6AZY7 606 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 CATSPER4Q7RTX7 472 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 TRAPPC11Q7Z392 1133 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 EFCAB13Q8IY85 973 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 SLC30A5Q8TAD4 765 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 AGPAT1Q99943 283 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 ADPGKQ9BRR6 497 aa19.52■□□□□ 0.72
SMC4-211ENST00000469858 A0A1B0GUA9 196 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 BUB1O43683 1085 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 B4GALT4O60513 344 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 TACC1O75410 805 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 IL18RAPO95256 599 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 SGPL1O95470 568 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 KRT5P13647 590 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 HOXD10P28358 340 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 HOXC8P31273 242 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 MAP2K2P36507 400 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.71
SMC4-211ENST00000469858 HTRA3P83110 453 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 FAM81BQ96LP2 452 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 IMPG2Q9BZV3 1241 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 APOBEC3GQ9HC16 384 aaKnown RBP19.52■□□□□ 0.71
SMC4-211ENST00000469858 ACP6Q9NPH0 428 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 MRFAP1Q9Y605 127 aa19.52■□□□□ 0.71
SMC4-211ENST00000469858 TMCO5BA8MYB1 307 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 ENC1O14682 589 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 ADAMTS4O75173 837 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 SLU7O95391 586 aaKnown RBP19.51■□□□□ 0.71
SMC4-211ENST00000469858 CST3P01034 146 aaPredicted RBP19.51■□□□□ 0.71
SMC4-211ENST00000469858 DARSP14868 501 aaKnown RBP19.51■□□□□ 0.71
SMC4-211ENST00000469858 NAP1L1P55209 391 aaKnown RBP19.51■□□□□ 0.71
SMC4-211ENST00000469858 SLC47A2Q86VL8 602 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 TRIM58Q8NG06 486 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 EPS8L1Q8TE68 723 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 ANKRD36BP1Q96IX9 119 aa19.51■□□□□ 0.71
SMC4-211ENST00000469858 TNNC2P02585 160 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 YY1P25490 414 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 NCBP1Q09161 790 aaKnown RBP19.5■□□□□ 0.71
SMC4-211ENST00000469858 NBPF20Q3BBV1 942 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 NOP9Q86U38 636 aaKnown RBP19.5■□□□□ 0.71
SMC4-211ENST00000469858 RPUSD2Q8IZ73 545 aaKnown RBP19.5■□□□□ 0.71
SMC4-211ENST00000469858 NOX5Q96PH1 765 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 NUB1Q9Y5A7 615 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 FAM170AA1A519 330 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 LACTBL1A8MY62 500 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 HMGCRP04035 888 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 NFICP08651 508 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 EIF4BP23588 611 aaKnown RBP19.5■□□□□ 0.71
SMC4-211ENST00000469858 CUL2Q13617 745 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 KYAT1Q16773 422 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 FAM47CQ5HY64 1035 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 TAF3Q5VWG9 929 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 PALB2Q86YC2 1186 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 RAET1EQ8TD07 263 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 TMEM40Q8WWA1 233 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 TSC1Q92574 1164 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 ALS2CR12Q96Q35 445 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 NOCTQ9UK39 431 aaKnown RBP19.5■□□□□ 0.71
SMC4-211ENST00000469858 THSD7BQ9C0I4 1608 aa19.5■□□□□ 0.71
SMC4-211ENST00000469858 UMODL1Q5DID0 1318 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 TRIP11Q15643 1979 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 MEFVO15553 781 aaPredicted RBP19.49■□□□□ 0.71
SMC4-211ENST00000469858 NPTXRO95502 500 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 ATP1A1P05023 1023 aaKnown RBP19.49■□□□□ 0.71
SMC4-211ENST00000469858 H2AFZP0C0S5 128 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 CYP11B1P15538 503 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 HOXA11P31270 313 aaPredicted RBP19.49■□□□□ 0.71
SMC4-211ENST00000469858 PDE6CP51160 858 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 MYL6P60660 151 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 NKX3-2P78367 333 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms