RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 NRLP54845 237 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 ST3GAL2Q16842 350 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 MAEAQ7L5Y9 396 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 PIGOQ8TEQ8 1089 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 DNASE1L2Q92874 299 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 CCDC43Q96MW1 224 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 CHRDQ9H2X0 955 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 PDZD7Q9H5P4 517 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 GPRC5CQ9NQ84 441 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 GJB4Q9NTQ9 266 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 RAB23Q9ULC3 237 aa14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 NDRG2Q9UN36 371 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-216ENST00000469400 ARID2Q68CP9 1835 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 MAN2B1O00754 1011 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 N4BP3O15049 544 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 USO1O60763 962 aaKnown RBP14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 B3GAT3O94766 335 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 CEBPBP17676 345 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 FCARP24071 287 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 GRM2Q14416 872 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 FAM187BQ17R55 369 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 CDCA2Q69YH5 1023 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 LAIR1Q6GTX8 287 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 CD300LGQ6UXG3 332 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 NOSTRINQ8IVI9 506 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 CELF5Q8N6W0 485 aaKnown RBP14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 PCDHA12Q9UN75 941 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.16□□□□□ -0.14
TRAPPC12-216ENST00000469400 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 TMEM189-UBE2V1I3L0A0 370 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 SLC30A4O14863 429 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 PTPN2P17706 415 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 XBP1P17861 261 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 TKTP29401 623 aaKnown RBP14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 PRPF4BQ13523 1007 aaKnown RBP14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 PPP2R5DQ14738 602 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 TMEM132AQ24JP5 1023 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 PPM1JQ5JR12 505 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 FAM78AQ5JUQ0 283 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 ANKS3Q6ZW76 656 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 NETO1Q8TDF5 533 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 DDX27Q96GQ7 796 aaKnown RBP14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 BRD9Q9H8M2 597 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 ZFP14Q9HCL3 533 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 USP20Q9Y2K6 914 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 GDAQ9Y2T3 454 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 CYP46A1Q9Y6A2 500 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 VWA8A3KMH1 1905 aa14.15□□□□□ -0.14
TRAPPC12-216ENST00000469400 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 I3L4J1 428 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 NRG2O14511 850 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 RETP07949 1114 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 RBM25P49756 843 aaKnown RBP14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 CCR3P51677 355 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 CLCNKBP51801 687 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 MAPK6Q16659 721 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 GLRA4Q5JXX5 417 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 PRSS36Q5K4E3 855 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 PRR23BQ6ZRT6 265 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 ZNF461Q8TAF7 563 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 FAM3CQ92520 227 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 TCEAL4Q96EI5 215 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 CORO1BQ9BR76 489 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 IER2Q9BTL4 223 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 TRMT61BQ9BVS5 477 aaKnown RBP14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 TTC12Q9H892 705 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 LMAN1LQ9HAT1 526 aa14.14□□□□□ -0.15
TRAPPC12-216ENST00000469400 USP24Q9UPU5 2620 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 ACKR2O00590 384 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 TRAPPC3O43617 180 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 DTNBO60941 627 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 LRP3O75074 770 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 CDKL5O76039 1030 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 ABLIM3O94929 683 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 LRG1P02750 347 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 EDN1P05305 212 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 PRKCBP05771 671 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 LIG1P18858 919 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 ATP2B1P20020 1258 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 ELF1P32519 619 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 BRCC3P46736 316 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 ROR1Q01973 937 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 SCRN1Q12765 414 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 NR5A1Q13285 461 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 CALCRLQ16602 461 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 UPP1Q16831 310 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 EEF1DP3Q658K8 133 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 SLC8B1Q6J4K2 584 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 MAP4K3Q8IVH8 894 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 C3orf58Q8NDZ4 430 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 MCPH1Q8NEM0 835 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 BSNDQ8WZ55 320 aa14.13□□□□□ -0.15
TRAPPC12-216ENST00000469400 IRF7Q92985 503 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms